Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi530g00026 ATGGCAGAAGCATTCCTCTCAGCTTCTGTGAAGGTGTTGTTAGACAAGATCATTTCCCGTGAGTTTGTGAACTTCTTTAGGAGCCAGAAGCTTGATGTTTCACTCCTTGAAAAGCTGAAAACAACACTGCTGAGTCTTCAAGCTGTACTAAATGATGCTGAGGAGAAACAGATGACAGACCCTTATGTCAAGGAATGGCTGGATAAGCTGAGAGATATTGTTGCTGAAGCTGACAACTTGTTGGATGAAATCAACACAGAGGCATTGCGATGCAAAGTGGAAGCTGAGTATCAAAGCCAAACTGTCAGTGCTAAGGTGAGGAACTTCCTTTCTTCTCGATTCAACCGGTTTAATAGGGAGATCAATTCTAAATTGCAAATCCAATTTGAAAGATTGGAACACTTGAGAAAGCAGAAACTTGGATTGAAAGGTGGTTCCAGCAGTGTATGGCATGGAACTCCTACAAGTTCTGTGGTAGATGAGTCTGGTATTTATGGTAGAGATGGTGACAGAAGAACCATTAGAGATTATCTGCTGTCAGAAGATGCTAATCATAGTGGCAGCAAAATAGGAGTGATTTCCATTGTGGGAATGGGAGGGATTGGTAAAACCACCCTTGCTAAACTTCTTTATAATGATCCAGTAGTAAAGGAGGAATTTAATTTGAAAGCATGGGCACATATCTCAAAGGATTTTGATCTTTGCAGTGTTACTAAAACACTTCTCGAATCTGTCACTTCAGACACAAATGGTGCTAATACCCCCAGTCCTCTGCATCTTGAATCTGTCACTTCAAAAAGAATTGATATTGGTGACCTGAATACTCTACAAGTGCAATTGAAGCAAAGTTTAAGCCATAAAAAAATTTTGCTTGTATTGGATGACATATGGGATGGAAGCTATGTCGATTGGAACAATCTAAAGGACATTTTTAATGCTGGGGAAGTGGGAAGCAAGCTCATCATCACAACAAGAGATGAAAGAGTTGCACTAGCCATGCAAACCTTTCTTCCTATCCACTATTTGACACCTCTGCAAAGTGAAGATTGCTGGTCTTTACTTGCCAAACATGCATTTGGAGCAAGCAACTGCCAGCAACGGTTCAGCCTAGAAGTAATTGGAAAAGAAATTGTCAAAAAATGTGATGGCTTACCATTAGCTGCAGTAGCACTTAGGGGACACTTAGGGCAACGGTTTAGTGCTGGGGAAGCTAACTTTGAAATGCATGATCTTATCAATGATTTAGCTGCAATGGTTTCATTTGCATACTGTATCAGGTTGCCTTCTGTAACATGCAACCTTTACAACCTGCAGACCTTGTTGTTGTCCGGTTGTTGGCGTCTCACTGAATTGCCTGAAGACATGGGAAAATTGGTGAATCTACGCCACCTTGATGTTAGTGGCACTCATTTGCAGGAGATGCCCATGCAAATAGCCAAACTACAAAATCTCCAAACCTTATCAGACTTTGTCGTCAGCAAACAGCATGATGGACTGATGATTGCAGAGCTGAGAAATTTTCTTCATCTACAAGGGAAACTTTCTATCTCAAAGCTACAAAATATTACCAACTCCTACGATGCTTTTCAAGCAAATTTGAAGATGAAAGAACAAATTGACGAGTTGGAACTAAAATGGGATTGGTATGGAGCTATTACTGAAGGTTCACAAATTCAAACTCTTGTAGTTGAACAATTGCAGCCCTCAACAAATATGAAGAAGCTCACCATTAATGGCTATGGTGGAACCAGCTTTCCAAATTGGTTAGGTGATTCTTCATTTGGCAACATGGTGTCTTTGTGCATAGGTGGTTGTCATCATTGTCCATCATTGCCACCCCTTGGACAATTGCATAGTTTGAAAGAACTCATCATTTCTGGGATGATATCAGTAAAGATAGTTGGTACTGAGTTCTATGGAAGTATATCTCCTTCATTTCAGTCATTTCCCTCATTGGAGACTTTGAAATTTTCAAGTATGCCAGAGTGGGAGACATGGAACTTGATTGGAGGTACAACTACAGAGTTTCCTAGTCTGAGATATCTGTCACTGAAAAATTGTCCAAAACTCAAAGGAAACATACCCAGCAACCTTCCTCACTTATCTAAACTAAAGCTATTCCAATGTGGTCTATTGGAATCAGGAGATTCAAATGATAATAGCAACAATATAAGGCCATCAGATCTATTCAACCAATTGATGCTGCCTTTCAATTCTCTAAAAGAGTTGACCATATTCGGCTTTCCCTCTCTGACATCCTTCCCAAGAGACGGTCTATCCAAAACTTTACGATCTCTCACTATTGATTCTTGTGAGAATCTAGACTTCCTTCCTCCTGAATCCTTCCAGAGTTACAAATCACTCGAGGATTTACGTATATCCAATAGCTGTAATTCAATGACTTCCTTTACCTTGGGCTCTCTCCCTGTGCTCAAAAGCTTTCATTTCTACCATTGCAAAAATCTTAAATGGATTTTCATTGTAGAAGAAGGGTCACAGTGTCTCTCATTTCTTCAAAGTATCAAAATATGGGGTTGTCATGAACTGGAGTCATTTTCCCCAGGTAGATTGCCCACTCCTAACCTCATTCATTTCCATGTGTCTAGTTGTAACAAGCTTCATTCACTACCACAACTAATTAACACTCTAACTGGCCTTCAAAAATTGGAAATTCATGGTTTACCAAATTTGCAATCTTTTGCCAAAGAGGGTCTACCTATCAATTTACGGAAACTAGATGTGGGCAATCATGGAGGGAATACAGCTATTACTAAGTGGAGTTTGGAACGACTCACTTGTCTTTCAGTGTTGGAAATTCGAGGTGATGATATTGTGAATGCGCTGATGAAAATGAAAGTGGCAATGCCATTGCTACCCATTTCTCTTGTGACCTTATGCATCGCTGATTTGAATGATATAAAAAGCTTGGACGGGAAGTGGCTTCAGCATCTCACCTCTCTCCAAAACCTTGAAATTTCACGCTCTCCCAATCTCACATTGTTGCCAGAAGAGGGATTGCCTCCCTCTCTTTCCGTACTGAGTATACAGAACTGCCCTTTGCTGAAAGCAAGTTGCCAGAGGAAGCGAGGGAAAGAGTGGCCTAAGATTGCTCAAATTCCCTGCATAATTATCCGTGATCAAATGAGTGTTCATGTAAGTTACTAA 3165 0.4038 MAEAFLSASVKVLLDKIISREFVNFFRSQKLDVSLLEKLKTTLLSLQAVLNDAEEKQMTDPYVKEWLDKLRDIVAEADNLLDEINTEALRCKVEAEYQSQTVSAKVRNFLSSRFNRFNREINSKLQIQFERLEHLRKQKLGLKGGSSSVWHGTPTSSVVDESGIYGRDGDRRTIRDYLLSEDANHSGSKIGVISIVGMGGIGKTTLAKLLYNDPVVKEEFNLKAWAHISKDFDLCSVTKTLLESVTSDTNGANTPSPLHLESVTSKRIDIGDLNTLQVQLKQSLSHKKILLVLDDIWDGSYVDWNNLKDIFNAGEVGSKLIITTRDERVALAMQTFLPIHYLTPLQSEDCWSLLAKHAFGASNCQQRFSLEVIGKEIVKKCDGLPLAAVALRGHLGQRFSAGEANFEMHDLINDLAAMVSFAYCIRLPSVTCNLYNLQTLLLSGCWRLTELPEDMGKLVNLRHLDVSGTHLQEMPMQIAKLQNLQTLSDFVVSKQHDGLMIAELRNFLHLQGKLSISKLQNITNSYDAFQANLKMKEQIDELELKWDWYGAITEGSQIQTLVVEQLQPSTNMKKLTINGYGGTSFPNWLGDSSFGNMVSLCIGGCHHCPSLPPLGQLHSLKELIISGMISVKIVGTEFYGSISPSFQSFPSLETLKFSSMPEWETWNLIGGTTTEFPSLRYLSLKNCPKLKGNIPSNLPHLSKLKLFQCGLLESGDSNDNSNNIRPSDLFNQLMLPFNSLKELTIFGFPSLTSFPRDGLSKTLRSLTIDSCENLDFLPPESFQSYKSLEDLRISNSCNSMTSFTLGSLPVLKSFHFYHCKNLKWIFIVEEGSQCLSFLQSIKIWGCHELESFSPGRLPTPNLIHFHVSSCNKLHSLPQLINTLTGLQKLEIHGLPNLQSFAKEGLPINLRKLDVGNHGGNTAITKWSLERLTCLSVLEIRGDDIVNALMKMKVAMPLLPISLVTLCIADLNDIKSLDGKWLQHLTSLQNLEISRSPNLTLLPEEGLPPSLSVLSIQNCPLLKASCQRKRGKEWPKIAQIPCIIIRDQMSVHVSY 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi530g00026 1054 Coils Coil 63 87 - -
Sebi530g00026 1054 Gene3D Ribonuclease Inhibitor 758 903 IPR032675 -
Sebi530g00026 1054 Gene3D Ribonuclease Inhibitor 904 1031 IPR032675 -
Sebi530g00026 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 411 IPR027417 -
Sebi530g00026 1054 PRINTS Disease resistance protein signature 192 207 - -
Sebi530g00026 1054 PRINTS Disease resistance protein signature 982 998 - -
Sebi530g00026 1054 PRINTS Disease resistance protein signature 381 395 - -
Sebi530g00026 1054 PRINTS Disease resistance protein signature 283 297 - -
Sebi530g00026 1054 SUPERFAMILY L domain-like 405 712 - -
Sebi530g00026 1054 Gene3D Ribonuclease Inhibitor 419 725 IPR032675 -
Sebi530g00026 1054 Gene3D - 10 127 - -
Sebi530g00026 1054 Pfam Rx N-terminal domain 5 98 IPR041118 -
Sebi530g00026 1054 Coils Coil 36 56 - -
Sebi530g00026 1054 Gene3D - 151 337 IPR027417 -
Sebi530g00026 1054 Pfam NB-ARC domain 189 397 IPR002182 GO:0043531
Sebi530g00026 1054 SUPERFAMILY L domain-like 731 1036 - -
Sebi530g00026 1054 Gene3D - 344 418 IPR042197 -
Sebi530g00026 1054 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 835 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi530g00026 Sebi-Chr530 397146 400940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi530g00026 193 385 WRKY Transcription Factor Family AT4G12020 28.934 5.88e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi530g00026 - - tpra:123916222 757.673