Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi530g00019 ATGCCCCACGTTGGGGGGTCGTGGAGTGCAATGGAACAAAATACCCCTTCTGTTAGTGTTCCCCCTTTTGATATATCTGCATCTCGAGGGCAGAGGATTCGTCCCAAAAGTATGCAATTTGATGATAATATCTTCTTACGTGACGATGATGTAAGGTTGATATATGTCAATGATCCCATCAAGACAAATGAAATGTATGAGTTCTGTGGGAATGAGATCCGAACCAGCAAATACACTCTTGTCACCTTCTTGCCCAAGAATCTGTTCATTCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCTATTGCTGCCCTCAATCAGCTTCCACCCCTGGCTGTCTTCGGGAGAACTGTGTCTCTTTTTCCCCTCTTGTTTGTGCTTTGTGTCACTGCGGTTAAGGATGCCTACGAGGATTGGCGCAGGCACAGGTCAGACCGCAATGAAAACAACCGAGAGTCACTCGTGCTTCAATCTGCTCAGTTCCGGCCCAAGACATGGAAAAGATTACAAGCTGGTGATGTTGTTAAACTCTTTGCTGATGAGATGATTCCTGCTGACATGGTCTTGTTGGGGACAAGTGATCAGAGTGGGATTGCCTATATTCAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACAAGATTTGCTAGGCAGGAAACAGCTTCAGCAGTATTGCCAGAAGCTTGTTCTGTCTCTGGAATTATTAGATGTGAGCAACCTAACCGGAATATTTATGAGTTCAATGCCAACATGGAGTTCAATGGGCATAAGTTTCCCCTTAACCAGTCAAACATTGTACTGCGTGGTTGCCAGCTGAAGAACACAGATTGGATAATTGGTGTTGTGGTTTATGCAGGACAAGAAACAAAAGCAATGATGAACAGTGCTGTTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAATAGAGAAACCTTTTGGTTGTCGGTTTTTCTTTTTATCATGTGTTCAGTTGTGGCCCTTGGGATGGGTCTCTGGCTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGAAAAACGTACTTTAATGATGGGCCAGATAAAGGAAAGAAATATAAATATTATGGGATACCGATGGAAACTTTCTTCTCCTTTCTGAGTTCTATCATAGTATTTCAGATAATGATACCGATATCCCTTTACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGATTGAAGACGGGGATATGTATGATGCTAACACTGGATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTGTTTTCAGACAAGACAGGAACACTAACGGAAAACAAAATGGAATTCCGGAGAGCTAGTGTACATGGGAAGAACTATGGGAACTCCTTGCTTTTGTCTAATAATAATACAGCAGCAGCTGTTGGTGGTAAACGTAGATGGAAGCTCAAGTCTGAAATTGCAGTTGATTCTGAATTAATGGCATTGTTGCAGAAAGACCGAAATACAGATGAAAGAATTGCTGCTCATGAGTTTTTCCTTACATTGGCTGGTTGTAATACTGTGATCCCTATTCTCAGTAGCAGTAGGTTTTCCAGTTGTGGAACAAGTGAATCAAATGAAGATATACAGAGTATTGATTATCAGGGAGAATCTCCTGATGAACAAGCCCTAGTTTCTGCTGCCTCTGCATATGGATATACTCTTTTTGAGCGAACATCTGGACATATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCCGTTGTTATCCGGTTTCCTGACAATGTCGTAAAGGTGTTAGTTAAAGGCGCTGATACTTCAATGTTAAGCATTTTAGCAAATGACAATGCAAGCAACATTAGCATACGGCATACAACTCAGAGTCACTTGAGTGAATATTCTTTGCAAGGGTTACGAACTCTTGTACTTGCCTCCAGGGATCTTTCAGATGCAGAACTTGATAAGTGGCAAAGAATGTATGAAGATGCAAGCACTTCATTGACTGACCGAGCTGCAAAACTACGTCAAACAGCAGCTCTTATAGAATGCAACTTAAAGCTACTTGGAGCAACTGCTATTGAGGACAAGCTTCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACTGGGGATAAGCAAGAGACCGCAATTTCAATTGGTCTTTCCTGCAAACTCCTGACTGCAGATATGCAGCAGATAATTATAAATGGCACTTCAGAGGTTGAATGCAGAAATCTCTTGGCAGATGCTAAAGCCAAATATGGTGTGAGATCTTCATATAACGGACATGAGAATCTAAAGCACAAAACCAGTGCTAGACATGATGATGGTCCTGATATTCCCAATGGTACGAAGTCATTGGGCATGCCCAAGTGGAATCCAGGAAAGGAAGAAGGAACTACTGCTCCACTGGCACTCATTATTGATGGAACCAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATTTGATAAAGAGCCATACAGATGATATGACATTAGCTATCGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGTCAATTTCGGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGCGTTGGTTATTTAGTTCTATACAACTTCTACCGCAATGCTGTCTTTGTCTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTATCCCTACTATGATTGTTGGTATTCTGGACAAAGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAACTGTATGCTGCAGGTCACCAGCAAGAGGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACACTATGGCAGAGCCTTGTTCTCTTCTATATTCCCTTATTCACCTATAAGGACAGCTCAATCGATATATGGAGCATGGGCAGTTTGTGGACAATTTCAGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATCAACCGTTGGGTATTAATTACTCATGCTGCAATATGGGGATCAATAATCACTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATCATTTGGCTAGGTCCCCTACATATTGGATAACGATTTTGCTTATAATAGTTGTGGCACTGCTCCCTCGCTTTACATACAAAGTTGTTCATCAAATTGTTTGGCCATCAGATATCCAGATAGCTAGAGAAGCTGAGGCAATGAGAAAACAACATGATGATTTGCAGTCAAGGCAACAAGTTTCCAATTAA 3570 0.4168 MPHVGGSWSAMEQNTPSVSVPPFDISASRGQRIRPKSMQFDDNIFLRDDDVRLIYVNDPIKTNEMYEFCGNEIRTSKYTLVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAVKDAYEDWRRHRSDRNENNRESLVLQSAQFRPKTWKRLQAGDVVKLFADEMIPADMVLLGTSDQSGIAYIQTMNLDGESNLKTRFARQETASAVLPEACSVSGIIRCEQPNRNIYEFNANMEFNGHKFPLNQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMMNSAVSPSKRSKLESYMNRETFWLSVFLFIMCSVVALGMGLWLVRHKNQLDTLPYYRKTYFNDGPDKGKKYKYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDANTGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGNSLLLSNNNTAAAVGGKRRWKLKSEIAVDSELMALLQKDRNTDERIAAHEFFLTLAGCNTVIPILSSSRFSSCGTSESNEDIQSIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMLSILANDNASNISIRHTTQSHLSEYSLQGLRTLVLASRDLSDAELDKWQRMYEDASTSLTDRAAKLRQTAALIECNLKLLGATAIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSEVECRNLLADAKAKYGVRSSYNGHENLKHKTSARHDDGPDIPNGTKSLGMPKWNPGKEEGTTAPLALIIDGTSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSHTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTMIVGILDKDLSHRTLLQYPKLYAAGHQQEAYNMQLFWITMIDTLWQSLVLFYIPLFTYKDSSIDIWSMGSLWTISVVILVNVHLAMDINRWVLITHAAIWGSIITTYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLIIVVALLPRFTYKVVHQIVWPSDIQIAREAEAMRKQHDDLQSRQQVSN 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi530g00019 1189 ProSitePatterns E1-E2 ATPases phosphorylation site. 443 449 IPR018303 -
Sebi530g00019 1189 Pfam Phospholipid-translocating P-type ATPase C-terminal 923 1163 IPR032630 -
Sebi530g00019 1189 SUPERFAMILY HAD-like 428 939 IPR036412 -
Sebi530g00019 1189 SFLD p-type atpase 425 946 IPR044492 -
Sebi530g00019 1189 MobiDBLite consensus disorder prediction 8 23 - -
Sebi530g00019 1189 SUPERFAMILY Calcium ATPase, transmembrane domain M 68 1161 IPR023298 -
Sebi530g00019 1189 CDD P-type_ATPase_APLT_Dnf-like 70 1055 - -
Sebi530g00019 1189 FunFam Phospholipid-transporting ATPase 126 296 - -
Sebi530g00019 1189 SFLD C1.7: P-type atpase like 425 946 - -
Sebi530g00019 1189 MobiDBLite consensus disorder prediction 1 23 - -
Sebi530g00019 1189 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 447 723 IPR023299 GO:0000166
Sebi530g00019 1189 PRINTS P-type cation-transporting ATPase superfamily signature 895 914 - -
Sebi530g00019 1189 PRINTS P-type cation-transporting ATPase superfamily signature 441 455 - -
Sebi530g00019 1189 Pfam Phospholipid-translocating ATPase N-terminal 54 119 IPR032631 -
Sebi530g00019 1189 NCBIfam phospholipid-translocating P-type ATPase 68 1170 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi530g00019 1189 Pfam Cation transport ATPase (P-type) 536 631 - -
Sebi530g00019 1189 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 53 1176 - -
Sebi530g00019 1189 NCBIfam HAD-IC family P-type ATPase 865 981 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi530g00019 1189 NCBIfam HAD-IC family P-type ATPase 706 758 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi530g00019 1189 FunFam Phospholipid-transporting ATPase 553 697 - -
Sebi530g00019 1189 Gene3D - 707 935 IPR023214 -
Sebi530g00019 1189 MobiDBLite consensus disorder prediction 799 821 - -
Sebi530g00019 1189 Gene3D - 551 687 IPR023299 GO:0000166
Sebi530g00019 1189 FunFam Phospholipid-transporting ATPase 709 935 - -
Sebi530g00019 1189 Pfam E1-E2 ATPase 155 399 - -
Sebi530g00019 1189 SUPERFAMILY Calcium ATPase, transduction domain A 152 294 IPR008250 -
Sebi530g00019 1189 Gene3D - 125 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi530g00019 Sebi-Chr530 264898 270255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi530g00019 4 1174 Primary Pumps ATPases AT5G04930 54.839 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi530g00019 K14802 - gmx:100788740 2019.2