Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi530g00015 ATGGATGAGTCAATTCAATTTGATTCAGATGAAAATGAAATGGTGAAGGGACTGGATAATTTATCCTTTTCCACAGATTATGGAAGCAGAACTGGTCCTGAAAGTGAAAGTGGTGATGAAGGTGGTTTAGGTGATGGAGGTGGAACTGGTGATGAAGGTGGTTCAAGTGATGGAGGTGGAAGCGGTAATGAAGGTTATTCAGATACATGGACTGAAGATGATGGTAATGTGTCCGATTATCAAGAGTGGTCTGCTAGCGATGGTAGACATGATACACTTAACGATGATGATATGGAAAATGCAACGAAAATTGGGATAAACAGTATGGGTGATATTGGTAAGATAGACTTGGTGACTTTTAGTCCTCATCTGATAACCAAGTATGACTTTGCTAGTTTGGATATGGCATACAAGTTCTACTGTCGCTATGCTAAAGCAAATGGGTTTAGTGTTAGAAGAGGAAGAATCTTACGCAGCAAGAAAACAGGGGAGGCCCTACAGCAAGATTTGTGGTGTTCTAATAAAGGTTTCCGGGAGGATAGGGGCCTTAAAATGGAAGATAGGAAGTGCGAGATAAGACCAGAAACCAGATGTGACTGTCGAGCAAATTTTCGAATTCATGTTGATAAAGTTACAAATCGTTGGTATGCAACGGTTTTTTATGATGAGCATAGTCATCCTTTATTGGACAAAAGGTATTCTGGTATGCTTCCCGGACATCGCAAGATGTATGAAAGTGATATAATTCAAATGAACAGCTTGTTGCAGGCAGGTATTAGCCCTGCTCACATTTTTGGGCATTTTGCTTTGCAATGCGGAGGTTATGAGAAAGTTGGGTTTAGGCTGAAGGACATATATAATCAGATTGAACGCCAAAGACGAAAGCAATGTTCGGATGCCATGGCTGCAATAGAATATTTGGGTGAGTTAGGTAAGAAGGATGAAATAATGTACTGTGAGCACACCATTGATGAGGAAGGTGACTATGATGTGGGTGAATTTCGTCAAAAGTGGATCGAGTTGGTTTCTAAGCTTGGCTTGCAAGAGCATCCATGGGTAAAAAAAATCTATGATTCAAGGTCAAAGTGGGCAAGTGCTTATTTTCGTGGAAATTTCTTTGCTGGCTTTAGAACAACTTCAAGATGTGAAAGTTTGCATGCTGAGTTAGGGAAGTATGTCCATTCCCGTTATAACTTGACCGATTTTTTGCAACATTATCATCGTTGCCTTAGTCATATGCGGTACAAAGAAATGGCAGATGATTTTTGTTCTTTACATGGTGTGCCTGTATTACAATCAAAGTTTCCAGCTATTGAAAAGTCGGCAGGGAAGCATTATACTAGGAGGGTGCTCAATGTCTTTCGGGTTCTTCTTAATAAGGCAGAGCTGCCAAAGTCATTAGTTTTGAGGAGATGGTCAAAAGGTGCAAAGGATGGTATCCGGACTTGTGGTGCTGAGGACACAAACTGCTGGGACACCCACAAGATTTGCAGAAAAGCTGTCCTTTCTGAATATTGCGACATATGGATTGAGCTAAATGCTGATACATATGAAGAATTTAATGAAGCAAAGGAAAGCATTGCACGTGACATTGAGGAAAAAAAGGCAAAGAAAGCTCAACAAAACATGACTGGTACGTCTACAAATTCAATTAATGATGATGTATTGAGAAACCCATTGCGTGCTAGTACAAAAGGTAGGGGTACTCCAAGTTCAGCAAGTTGGGGTGTGAGAGTGAAGAGGAGGACCCATTGCTCATATTGCAAACAAAGTGGGCATAATAGGGTTACGTGCCCAGCAAAAATCCGGGACTCACAAATGACACAGACCACTACGTCTAGCCTGCACCATGGAGATGATGAAACTGGTTATTATGAATCTGAGGGTTTTGATCACAGCAGTGTTGCTGCAAATTAA 1917 0.4095 MDESIQFDSDENEMVKGLDNLSFSTDYGSRTGPESESGDEGGLGDGGGTGDEGGSSDGGGSGNEGYSDTWTEDDGNVSDYQEWSASDGRHDTLNDDDMENATKIGINSMGDIGKIDLVTFSPHLITKYDFASLDMAYKFYCRYAKANGFSVRRGRILRSKKTGEALQQDLWCSNKGFREDRGLKMEDRKCEIRPETRCDCRANFRIHVDKVTNRWYATVFYDEHSHPLLDKRYSGMLPGHRKMYESDIIQMNSLLQAGISPAHIFGHFALQCGGYEKVGFRLKDIYNQIERQRRKQCSDAMAAIEYLGELGKKDEIMYCEHTIDEEGDYDVGEFRQKWIELVSKLGLQEHPWVKKIYDSRSKWASAYFRGNFFAGFRTTSRCESLHAELGKYVHSRYNLTDFLQHYHRCLSHMRYKEMADDFCSLHGVPVLQSKFPAIEKSAGKHYTRRVLNVFRVLLNKAELPKSLVLRRWSKGAKDGIRTCGAEDTNCWDTHKICRKAVLSEYCDIWIELNADTYEEFNEAKESIARDIEEKKAKKAQQNMTGTSTNSINDDVLRNPLRASTKGRGTPSSASWGVRVKRRTHCSYCKQSGHNRVTCPAKIRDSQMTQTTTSSLHHGDDETGYYESEGFDHSSVAAN 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi530g00015 638 MobiDBLite consensus disorder prediction 60 83 - -
Sebi530g00015 638 Coils Coil 517 537 - -
Sebi530g00015 638 MobiDBLite consensus disorder prediction 608 638 - -
Sebi530g00015 638 Pfam FAR1 DNA-binding domain 138 229 IPR004330 -
Sebi530g00015 638 MobiDBLite consensus disorder prediction 1 96 - -
Sebi530g00015 638 MobiDBLite consensus disorder prediction 18 32 - -
Sebi530g00015 638 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 128 246 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi530g00015 Sebi-Chr530 223563 226261 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi530g00015 FAR1 4.4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi530g00015 - - tpra:123913749 239.965