Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi530g00004 ATGGCAGTCACATTCTACGACCTTAGCTCTGATTTTGGGTTGAAAAAGCTTGATGAGTACCTTCTCACCCGCAGTTATATCACTGGTTACCAAGCTTCAAAGGATGATGTTACCGTATATGCAGCTTTGCCAAAGGTTCCATCAGATGAATATGTGAATGTGTCCAGGTGGTACAAGCACATTGACGCTTTGTTGAGAATATCTGGTGTTTCTGGTGAGGGATCTGGTATCACTGTGGAGGGATCTTCTCTCGTGGGAGAGGCTGTTGCCACCCCCCCAGCTGCTGACACAAAGGCAAAGACTGAGGAAGAGAAGAAGGCAGCTGAAGAACGGGCAGCTGCTGTGAAGGCGGCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAAAAACTTGAAGAAGCAGTGAGATCTGTTCAGATGGAAGGGTTACTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAACTCCAAATTATGCTTACTATTGTGGATGATCTAGTCTCTGTCGACAATCTTATTGAGGAATATCTTACAAATCTACAATTCCCATACTTGGAGATCCTGGCAGTGGAAGAGATTGCATGTCTTGGAAAATGTCCTAGGGATACTACTACCCTAAGTTCAGATTTTTTGTTTCCAGAAACCTTGTTATTGCTGTCATTTGATGTCAGTTTTCCTTTGTACTTGGATGGTCTTATAATCTTTAGGCTTTAA 768 0.4323 MAVTFYDLSSDFGLKKLDEYLLTRSYITGYQASKDDVTVYAALPKVPSDEYVNVSRWYKHIDALLRISGVSGEGSGITVEGSSLVGEAVATPPAADTKAKTEEEKKAAEERAAAVKAAGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEYLTNLQFPYLEILAVEEIACLGKCPRDTTTLSSDFLFPETLLLLSFDVSFPLYLDGLIIFRL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi530g00004 255 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 199 - -
Sebi530g00004 255 SUPERFAMILY GST C-terminal domain-like 13 67 IPR036282 -
Sebi530g00004 255 CDD EF1B 124 194 IPR014038 GO:0003746|GO:0006414
Sebi530g00004 255 Gene3D - 4 76 - -
Sebi530g00004 255 SUPERFAMILY eEF-1beta-like 123 195 IPR036219 -
Sebi530g00004 255 Coils Coil 98 118 - -
Sebi530g00004 255 FunFam Elongation factor 1-delta 1 3 78 - -
Sebi530g00004 255 FunFam Elongation factor 1-beta 1 like 120 211 - -
Sebi530g00004 255 SMART EF1_GNE_2 126 211 IPR014038 GO:0003746|GO:0006414
Sebi530g00004 255 Pfam EF-1 guanine nucleotide exchange domain 128 196 IPR014038 GO:0003746|GO:0006414
Sebi530g00004 255 Gene3D - 119 209 IPR014717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi530g00004 Sebi-Chr530 56230 58087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi530g00004 5 196 Eukaryotic Initiation Factors Gene Family AT2G18110 73.684 8.62e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi530g00004 K03232 - sind:105166169 283.108