Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi52g00092 ATGGCGTCGAACAAGATCGAACGCGGTCACCAGATGTACCGTGATGGACGCTACAGCGAGGCGTTAGGGTTCTACACGGAGGCAATCGCCATGGCCAAGACCAATCCCCAGAAGATCGCTTTGCATAGCAATCGAGCTGCTTGCTACCTCAAGCTTCACGATTTCAAGAAGGCAGCAGAAGAGTGTACCTCAGTGCTTGAGCTTGATCACAAACACAGTGGAGCATTGATGCTGCGGGCTCAAACACTGGTGACCCTGAAGGAGTATCATTCTGCACTTTTTGATGTCAATAGACTCTTGGAGTTGAATCCATCCTCAGAAGTCTATCAAAATCTTCATGCTCGCTTGAAGACACAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAGGGAGATGAGAATGATGAGGTGATGCTAAATAGAGAGAACAAGAAGATGAAATGGGAGAAAAATATGCAGCAACATCTAATATAA 489 0.4601 MASNKIERGHQMYRDGRYSEALGFYTEAIAMAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLSLAPIPESEEEFEEQGDENDEVMLNRENKKMKWEKNMQQHLI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi52g00092 162 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 156 - -
Sebi52g00092 162 SMART tpr_5 2 35 IPR019734 GO:0005515
Sebi52g00092 162 SMART tpr_5 73 106 IPR019734 GO:0005515
Sebi52g00092 162 SMART tpr_5 39 72 IPR019734 GO:0005515
Sebi52g00092 162 Pfam Anaphase-promoting complex, cyclosome, subunit 3 16 93 - -
Sebi52g00092 162 SUPERFAMILY TPR-like 6 119 IPR011990 GO:0005515
Sebi52g00092 162 Gene3D Tetratricopeptide repeat domain 1 122 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi52g00092 2 120 Calmodulin-binding Proteins AT3G25230 34.351 1.08e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi52g00092 - - gmx:100801778 253.447