Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi52g00069 ATGGCTTCCATTAGTGGCTACAAAGCAAGTGACCTGTTCCAAGCTCAAGCTCACTTGTACAGAGTCATGTATAGCTTCTTGAATCCCATGTGCATTAAGTGGGCCATTGACCTTGGCATACCAGATATAATCCACAACCATGGCCAAGCCATTACTCTTTCTGAGCTGGTTTCAACTCTTCAGGTTCCACAAGCAAAAGCTACTTGCATCCAGCGCCTCATGCGATTATTGGTACACAATGACATCTTTGCAATCCTCAAAATAGATGACAACATAGAAGGGAAAGAAGCATATGCTCTTACTCCAACATCACAACTCCTTGTCAAAGGCAATGATCATTGCTTATCTTCAATGGTTCAGTTTTTAAATGACCCAACTCTGGTTGGTTTATACCATCAATTGGGGAAGTGGACTTTTGGGGAGGAGCTCACAATTGTTGAGACTGCATTAGGCCTAGGAAGTTATTGGGATTTTATTAATCAAAATCCCACTCACTTGAAGATTTTCAATGAGGCTATGGAAAGTGATTCTCACTTGATAAGGTTGGCACTGAGAGATTGTAAATCAGTTTTTGAGGGACTGGATTCCTTGGTTGATGTTGGTGGGGGAACTGGAAATACAGGCTTAACAGGAAGCAACAATTTGAGTTTTGTTGGTGGGAACATGTTTAAGTCTATCCCTCATGCTGATGCAGTTTTACTTAAGTTGATGTTACACAATTGGAGCGACAATGATTGTATAAAGATACTAAAAAATTGCAAAGAAGCTATTTCAGGAAAAGGCAAAGGAGGAAAACTGATCATCATAGATATAGTGATAAATGAAAAGCAAGATGAGCATGAAATGACAGAACTAAAGCTTTTGCTTGATGTAGTTATGATGACCAGTGTCAATGGAAAAGAGAGAGATGAAAAAGATTGGAAGCGACTTTTCATGAAAGCGGGCCTTGAGCACTATAAAATATTTTGCACATTTGGGACATGGTCTCTTATTGAGCTTTATCCTTAA 1008 0.3938 MASISGYKASDLFQAQAHLYRVMYSFLNPMCIKWAIDLGIPDIIHNHGQAITLSELVSTLQVPQAKATCIQRLMRLLVHNDIFAILKIDDNIEGKEAYALTPTSQLLVKGNDHCLSSMVQFLNDPTLVGLYHQLGKWTFGEELTIVETALGLGSYWDFINQNPTHLKIFNEAMESDSHLIRLALRDCKSVFEGLDSLVDVGGGTGNTGLTGSNNLSFVGGNMFKSIPHADAVLLKLMLHNWSDNDCIKILKNCKEAISGKGKGGKLIIIDIVINEKQDEHEMTELKLLLDVVMMTSVNGKERDEKDWKRLFMKAGLEHYKIFCTFGTWSLIELYP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi52g00069 335 Gene3D - 2 107 IPR036388 -
Sebi52g00069 335 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Sebi52g00069 335 Pfam O-methyltransferase domain 213 316 IPR001077 GO:0008171
Sebi52g00069 335 Pfam O-methyltransferase domain 144 206 IPR001077 GO:0008171
Sebi52g00069 335 Gene3D Vaccinia Virus protein VP39 209 335 IPR029063 -
Sebi52g00069 335 PANTHER O-METHYLTRANSFERASE 13 319 IPR016461 GO:0008168
Sebi52g00069 335 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 335 IPR016461 GO:0008168
Sebi52g00069 335 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Sebi52g00069 335 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Sebi52g00069 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 333 IPR029063 -
Sebi52g00069 335 PIRSF O-mtase 1 210 IPR016461 GO:0008168
Sebi52g00069 335 PIRSF O-mtase 208 335 IPR016461 GO:0008168
Sebi52g00069 335 Gene3D Vaccinia Virus protein VP39 108 208 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi52g00069 Sebi-Chr52 1569633 1570889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi52g00069 29 333 Monolignol Biosynthesis Gene Families AT5G54160 28.916 5.75e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi52g00069 K22588 - gmx:100813225 370.163