Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi52g00037 ATGGAGATGGAGTTAAATAGTGATGATTCGGCTGTTAATCTGGATGATGATAGAGATTTTAGTTATAGTGATTCTTCTAGCTCTAGCGATGATGAAAATCATAATCAAAATGATAGAGTTATTGATTTTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGGAAATGAAGCTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAGGATAATTGATTTAACAAGTGATGATATATGGGCATTGGAATTCTATAGTGAAAATGATGCTTTCAATTTTTACTTTTATTATGCAAGATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAATAAAGGTATGCTCATAATGCGACAATTCTTATGTAGTAGGGCTGGTTTTAGGGACAAAAAGCATTTGATTAGGTTAGATCGGAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGGTTTGATTATAAGACTGGGAAATTTAAGGTTATTTCCTTTTTAGACTCTCATAACCATGAATTGACCCCTGCTAAATTTGTACCTTTAATGCCTGCATCTCATGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAGATAATGGGTTTTCTTGTTGATCAAAAAGGAGGTTATAGAAACGTCGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTAAGAGGGCTGATGGTTTGGATAAGGTAGAACCTGATATGATGAGGGTGTGTCGTTTTGTTCTTGCTAGCTCCCACTATAACATTATTTGTGATATGGTTTCCCAAAAACGTGAGCATTTTAAGCAGTTCATTGGTGACATTATGAAGCTGAAACAAAAGTATGAGAATCTGTGTTCCGTTAGTAGCACAAGTACTGTTGAGATTAATGTTGTGCATGATCCCACTATGGTGAAGACCAAAGGTGCTCCTACGAAGGCTAGGAAGAGGCGTAAGAGAAAGAGATGTTCCAACTTTCAAGCCAGTGGACATGTCATCACAACTTGTCCTAGACTGGTTCCACCAGAAGATGAAGTCAACATTAATCATGAAGTTTCAGGAGCTGAGTCTGAAAGTCTAATGAGGGATGCTGACAAAAGTGAGGAAGGAATTGCATTTGATCACAATGTCACAGACAGAAGCTCCAATCACATCTCAAGAAGAATTAGTCACAGTTTGGACAATGCATCAAGTAGTGCTAATAGTCACTTGAAGAAAAAGAAGATGAAGTCCCTTTCCCAGCTTTCAGACTCTGTCTGTGTGAGTACAGAAGATAAGCATAATCGATCTCATTCCAGAGCAAAACAAGGAAGACATGGTCCCAAAAAAAGTGGTGCAGACTTAAAAGGTCCATCACCCAAACCAGAAAAAGAAGTTCAACAACATGGTTCTGTCATTCCCACAACTGAGAATGCAACCACAGTTCCTATTGGGTTTCCAACCAATATGTGTGCACCAACTTTAAACAATCAGTTACCAAGAGGTGGTCCTTCTTCTGTTGGAAATATTCATATACGTGAGGATATGTCTATTACATTACCTTATCCAAATTCATCTCAGGGTAATGTGATGTTACCAAATGAAGGGAGTTGTCTGGCTCATGGGTTATTTCCTTTATTCCCAACTCAATCCCAAGTTCATATCAATTCCCAGCAGTCCACGGTAGTTATAGTGATTTTGTTAAGTTTTCTTATCCGCAGAATGAAGTTGCAAATTATGATGCTAATAGGCCTACTGTATGGAATGATCTACTCCGAAATGTCATTAGAAATAGTGGTGGATGAGGTGACAAGAAGGGAACGAAATAATGACATCATGGAAGAATATGGTCAAAGGCTTAATTAG 1902 0.3843 MEMELNSDDSAVNLDDDRDFSYSDSSSSSDDENHNQNDRVIDFEDEVNEEEVDTDEGNEAMDAEVGGEVSRRIIDLTSDDIWALEFYSENDAFNFYFYYARCHGFAVRRDDVIKDNKGMLIMRQFLCSRAGFRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKFKVISFLDSHNHELTPAKFVPLMPASHGLSDGDKAQVDALHSHGVRPCQIMGFLVDQKGGYRNVGFSKKDLYNYIDEVKRADGLDKVEPDMMRVCRFVLASSHYNIICDMVSQKREHFKQFIGDIMKLKQKYENLCSVSSTSTVEINVVHDPTMVKTKGAPTKARKRRKRKRCSNFQASGHVITTCPRLVPPEDEVNINHEVSGAESESLMRDADKSEEGIAFDHNVTDRSSNHISRRISHSLDNASSSANSHLKKKKMKSLSQLSDSVCVSTEDKHNRSHSRAKQGRHGPKKSGADLKGPSPKPEKEVQQHGSVIPTTENATTVPIGFPTNMCAPTLNNQLPRGGPSSVGNIHIREDMSITLPYPNSSQGNVMLPNEGSCLAHGLFPLFPTQSQVHINSQQSTVVIVILLSFLIRRMKLQIMMLIGLLYGMIYSEMSLEIVVDEVTRRERNNDIMEEYGQRLN 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi52g00037 633 MobiDBLite consensus disorder prediction 459 475 - -
Sebi52g00037 633 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 245 - -
Sebi52g00037 633 MobiDBLite consensus disorder prediction 43 57 - -
Sebi52g00037 633 MobiDBLite consensus disorder prediction 409 482 - -
Sebi52g00037 633 MobiDBLite consensus disorder prediction 11 42 - -
Sebi52g00037 633 MobiDBLite consensus disorder prediction 1 57 - -
Sebi52g00037 633 Pfam FAR1 DNA-binding domain 94 184 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi52g00037 Sebi-Chr52 853724 857116 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi52g00037 FAR1 3.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi52g00037 - - ccaj:109794460 229.18