Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi52g00007 ATGAATGCTAATCCTAAGGCTGATAAACCAGTAAATTCAACAAAATCCCAGAAGTCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACTCGGTTGCAACTGTGCAAAAGATTGTGAAGGAAGTACCGAGGCCTGATAACAAGAATGAAGTGGGGAAATCTCAAACAGGGGGAGGGGAGAAGGTAGCTTCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGCAAACAGTTACCCTGTGTTTTCCTTGACACTCCTGGGCACGAGCTCAACTTTGCACTTTTCTTTCCCTTAGATGATACTATTATATATGCTCCTGTAGGCATTTGGGGCAATGAGAGCGCGTGGAGCAAGTGTAACAGACATTGCATTATTGTTGTGGCTGCTGATGATGGTATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTACCCATAATCATTGCTATAAACAAGGCAGGCCAACATGATATAGATAAAGATGGAGCAAATCCAGATCGAGTCATGCAAGAGCTTTCTTCAATTGGTTTAATGCCAGAGGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTCAAGGGAAGAATGTAGATGATCTTTTGGAAACTGTTATGCTTGTTGCCGAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGTGTTGATGTGGGTACACCTTCTATACCAGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGAATCCCTTGATACTGCACGTGAAAGAGCAGAGTCCCGCGCTGAGTCATTGCGAAATGAGCGTATTTCAGCAAAGGCAGGGGATGGCAAGGTCACCCTCTCTTCCTTAGCTTCTGCAGTTTCAGCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTAAATATTATTTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTGTCAGACAAGCCCTGCGGGTGCTACCCCAAGATAATGTCACACTAAAGTTTTTGTTGGAAGCAACAGGTGATGTAACCACAAGTGATGTTGACCTTGCGGTTGCCAGCAAAGCTGTTATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTCAAAACCTATGCAGAAAATAAAGCTGTTGAGATTAGAGTGTATAAAGTTATTTATGAATTAATTGATGATGTACGAAATGCAATGGAAGGGCTCTTGGATCCTGTTGAGGATCAAATAACAATTGGCTCAGCAGAAGTACGGGCCACGTTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGTATGGTTACAGAGGGAAAGGTACTGAAAGGCTGCGGTATTCGTGTCATTCGGAAGGGAAAAGTTGTTCATGTTGGCATTCTTGATTCTTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTTAATGCTGGTCTTGAGTGTGGACTTGCGTTAGAAGATTTTGATGATTGGGAAGATGGACGATCGATGTTGGGGTATTCTCTGACTTCCCCAGATTTGGTCATCTGTGCTGGCTCACCAGATATTGCTGGAATGAGCTATGATGACTCTCCTGAGTTGTTGAATAGCAAATGTGGTAAGAATTTGGAGTCATCTATGGAGCTTTCTCTAGAGAATGGAATCAATGGCCTCCTTGAGCTTCTTCCACCACCTGTAACCAAGGTTGAGTCACCCCAAGACTGCTCTCCAAGTGAGTTCATAGGAGATGATGAAATGCTAGAAGATGCTGGAGTGTCTCAGGAGGCGGAATTGGAGTCCTCTGAGGATGCTGAGGATATTGGGGTGGAAGAGAAGTTTCAGAAGCTGAAGAGAGACTTTGAGAGTCAGAGAAAGGAGCTGGCAGAAACAAGGAGGGAGTTGGGGGAGATCAAGAGGGAGAATCAACAGAAGAGTAGAGAATGCCAAGAAGCATGGGACTCCTTAAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAGGAGAAAAGCAGGTGGTTTTCATCACTAAGAGACTTGATGAGGAAAGTGAAGATTATGAAAATGGAGCACATCAAGCTATTAGAGGAAGCAGAAGCATACAAGAAATGTGAAGCAGATATGCTTGAAATGGGGCTTATCATCAAGTCTAAAATAAATGAACAACAGGAGTCACATGAAGATCTCAAGTCCAAATATATTGAAGGGGCTAAGGAACGAAAAGAGCTTTACAATAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTCTCAATGCTGATGAGATAAAAGCAGGAGCCACAATGGCCTTAGATTTTGATTCTGATAAAGATGGTGAGCTTACTGTTTTGTCAAATGGAGTTCCTAGAAAGACTTTTAAGTTTGATGCTGTCTTTGGCCCCCAAGCTGAACAAGCCGATATTTTTGAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGGTACAATGTATGCATTTTTGCATATGGACAGACTGGGACTGGAAAAACTTTCACAATGGAGGGCACAGAAGAAGCTCGTGGAGTTAATTTCAGAACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGACAAACACTCTATCGTTATGATATCTCTGTAAGTGTCTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTTCAGGAAATCAGCCAGGAATGGCTGCAAGAAGACTAGAAATAAGACAAGCTGGTGAAGGAATGCATCACATTCCTGGGTTGGTTGAGGCACATGTGAACAACATGACTGAAGTCTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCCAATGAGCACAGCAGCCGATCCCACTGCATTCACTGTGTTATGGTAAAAGGGGAGAATTTGTTGAATGGGGAACACACCAGAAGCAAGTTATGGCTGGTGGACCTAGCAGGCAGTGAACGAGTTGCAAAGACAGAAGTGCAAGGTGATCGACTGAAGGAGACACAAAACATCAATAGGTCTCTGTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACTAAAAGTTCACACATCCCTTTCAGGAATTCCAAGCTTACCCACTTGCTGCAAGACTCATTAGGGGGAGATTCAAAGGCACTCATGTTTGTTCAGATCAGTCCTAATGAAAATGATTTGAGCGAGACAATTTGTTCTCTGAACTTTGCTAGTAGAGTAAGGGGAATAGAATTGGGCCCTGCTAAAAAGCAGTTAGACACTACTGAACTTCTGAAACACAAACAGATGGCTGAGAAAACCAAACAAGAGGTAAAGCTGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGTCCAAGATGAAGGATAGAGATAATAAAAACAAAAATCTGCAAGAAAAGGTCAAGGAACTGGAATCACAACTTATGATTGAGAGAAAACTAGCACGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAAATGAAACACCAAGAAGAGCAAAACAATGCACTTAATAGATCAGCACTTGCAAATCGACCTCTAGGAAGTCTCAAGAATTTCAATGATCCAGCTAGTGTTGGATGGTGCAAAGACCAAGTAAATTCAGCTAGACCACTTATGGAGAACAACATCTTAAAACCTTGTATACCCTTTACTACAATGGAGAATTCCATCAAGTGCATTGATCATGCTGAGAAAGAAAACAACCCTGACATGGCTGAAAAAACACTACTTCAAAAAAGGACTGGAAGAGCTTCTATCTGCACAATGACACCACGTGTTCCTTCAGCAATTGCTTCAAGGCGCAATTCTCTGATTCCACTTCCAACTGTACCGAGCTTAACACAGCTCCAATCACCATTACTACCCAAGTTAACATACCAAGGTGATTATTATCAGAAAGATGTCAATGGGGAATCAGAAACCAGCTGTTTGCCTGCACAGACTCTTTCTGAGAGTCCCAAAGAAGTTAGAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGCATACATAAGAAAATGCAGGTAAAGTCTCCACTGCAGCAACATATGAGAAGGGTTGGTGTAAATGTAGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGTAGAGGAAGATTGACACAAAGGGTGCAAGTGGGAAGTGGTAGAAGAGGTGGAGCTAAAGAGATCCAACAAAAGAATAGTCAAAAGGAAAAGGAAAGGGGATGGATATGA 4290 0.4277 MNANPKADKPVNSTKSQKSKTLKSVWRKGDSVATVQKIVKEVPRPDNKNEVGKSQTGGGEKVASSEAGGITQGIGAYKVQVPVDGKQLPCVFLDTPGHELNFALFFPLDDTIIYAPVGIWGNESAWSKCNRHCIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKAGQHDIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALQGKNVDDLLETVMLVAEVRALFDDGGKRVDVGTPSIPVQVIGLNNVPIAGDEFEVVESLDTARERAESRAESLRNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIILKVDLQGSIEAVRQALRVLPQDNVTLKFLLEATGDVTTSDVDLAVASKAVIFGFNVKAPGSVKTYAENKAVEIRVYKVIYELIDDVRNAMEGLLDPVEDQITIGSAEVRATFSSGSGRVAGCMVTEGKVLKGCGIRVIRKGKVVHVGILDSLRRVKEIVKEVNAGLECGLALEDFDDWEDGRSMLGYSLTSPDLVICAGSPDIAGMSYDDSPELLNSKCGKNLESSMELSLENGINGLLELLPPPVTKVESPQDCSPSEFIGDDEMLEDAGVSQEAELESSEDAEDIGVEEKFQKLKRDFESQRKELAETRRELGEIKRENQQKSRECQEAWDSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLMRKVKIMKMEHIKLLEEAEAYKKCEADMLEMGLIIKSKINEQQESHEDLKSKYIEGAKERKELYNKVLELRGNIRVFCRCRPLNADEIKAGATMALDFDSDKDGELTVLSNGVPRKTFKFDAVFGPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQTLYRYDISVSVLEVYNEQIRDLLVSGNQPGMAARRLEIRQAGEGMHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKKQLDTTELLKHKQMAEKTKQEVKLKDLQIKKMEETIHGLESKMKDRDNKNKNLQEKVKELESQLMIERKLARQHVDSKIAEQHQMKHQEEQNNALNRSALANRPLGSLKNFNDPASVGWCKDQVNSARPLMENNILKPCIPFTTMENSIKCIDHAEKENNPDMAEKTLLQKRTGRASICTMTPRVPSAIASRRNSLIPLPTVPSLTQLQSPLLPKLTYQGDYYQKDVNGESETSCLPAQTLSESPKEVRSGVKKIGSILRRSIHKKMQVKSPLQQHMRRVGVNVGMEKVRVSIGSRGRLTQRVQVGSGRRGGAKEIQQKNSQKEKERGWI 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi52g00007 1429 SMART kinesin_4 765 1101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi52g00007 1429 Pfam Kinesin motor domain 773 1093 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi52g00007 1429 MobiDBLite consensus disorder prediction 1 20 - -
Sebi52g00007 1429 Coils Coil 265 292 - -
Sebi52g00007 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 767 1131 IPR027417 -
Sebi52g00007 1429 Gene3D Kinesin motor domain 713 1095 IPR036961 -
Sebi52g00007 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 226 IPR027417 -
Sebi52g00007 1429 SUPERFAMILY Translation proteins 422 508 IPR009000 -
Sebi52g00007 1429 PANTHER KINESIN-LIKE PROTEIN KLP-3 586 1245 IPR027640 GO:0003777|GO:0007018
Sebi52g00007 1429 Gene3D Translation factors 420 512 - -
Sebi52g00007 1429 Gene3D - 314 418 IPR036925 -
Sebi52g00007 1429 PRINTS Kinesin heavy chain signature 1043 1064 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi52g00007 1429 PRINTS Kinesin heavy chain signature 994 1012 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi52g00007 1429 PRINTS Kinesin heavy chain signature 963 980 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi52g00007 1429 PRINTS Kinesin heavy chain signature 841 862 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi52g00007 1429 Gene3D - 48 217 IPR027417 -
Sebi52g00007 1429 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 313 425 IPR036925 -
Sebi52g00007 1429 FunFam kinesin-like protein KIN-14R 712 1095 - -
Sebi52g00007 1429 Gene3D Translation factors 218 298 - -
Sebi52g00007 1429 SUPERFAMILY Translation proteins 223 266 IPR009000 -
Sebi52g00007 1429 MobiDBLite consensus disorder prediction 1394 1429 - -
Sebi52g00007 1429 CDD mtIF2_IVc 425 502 - -
Sebi52g00007 1429 Coils Coil 614 662 - -
Sebi52g00007 1429 ProSiteProfiles Kinesin motor domain profile. 767 1093 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi52g00007 1429 FunFam Translation initiation factor IF-2 419 513 - -
Sebi52g00007 1429 CDD KISc_C_terminal 765 1095 - -
Sebi52g00007 1429 MobiDBLite consensus disorder prediction 1415 1429 - -
Sebi52g00007 1429 FunFam Translation initiation factor IF-2 314 419 - -
Sebi52g00007 1429 Coils Coil 1114 1169 - -
Sebi52g00007 1429 MobiDBLite consensus disorder prediction 1 65 - -
Sebi52g00007 1429 CDD IF2_eIF5B 61 227 - -
Sebi52g00007 1429 Pfam Translation-initiation factor 2 314 407 IPR023115 -
Sebi52g00007 1429 Pfam Elongation factor Tu GTP binding domain 133 223 IPR000795 GO:0003924|GO:0005525
Sebi52g00007 1429 ProSitePatterns Initiation factor 2 signature. 468 490 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Sebi52g00007 1429 ProSitePatterns Kinesin motor domain signature. 993 1004 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi52g00007 Sebi-Chr52 138493 158991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi52g00007 742 1120 Calmodulin-binding Proteins AT5G65930 42.377 9.64e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi52g00007 K10406 - gmx:100779622 1531.54