Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi529g00022 ATGGGCTGTGGGAATGGTTACCTGGGTGGCAGACTCAGTAAATACAGCACTGCTGCTGCCATTGAACAAGAACCCATTAAACCATCAGTGCAAGTAGAGCATACCCAGCTCTTAATTGATGGGAAATTCGTAGATGTTGCTTCTGGGAAAACTTTTCCAACGTTGGACCCTAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACGCTGAAGATGTTGATCGTGCAGTTGCAGCTGCACGCAAAGCATTCGATCAAGGACCATGGCCTAAGATGCCAGCCTATGAAAGGCAAAGGATATTGTTGCGGGCTGCTGATCTATTGGAAAAGCATAATGATGAGCTTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATATGAACAATCTGCTCAGATTGAAATTCCAATGCTGGTTCGCCTATTTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACCACACCATGTGCAAACACTGCATGAACCCATTGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTGTTTGGAAGGTGGGACCTGCTTTGGCCTGTGGCAACTCTATTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGCAGCAAAACTACTTCATGAGGCTGGACTTCCTCCTGGTGTTTTGAATATAGTATCTGGCTTTGGTCCAACTGCTGGTGTTGCACTTGCTAGTCACATGGATGTTGATAAGGCTGTTGAGCTAGCACACTTTGCCTTATTCTTTAATCAGGGACCATGTTGCTGTGCTGGGTCTCGAACATTTGTACATGAACGTGTATATGATGAGTTTGTTGAGAAAGCAAAGGCTAGAGCTTTAAAACGTATTGTTGGTGATCCATTCAAGGCAGGAATAGAGCAATGTCCTCAGATTGATTCAGATCAATTTGAGAAAATACTGAGGTATATCAAATCTGGTGTTCAAAATGGGGCTACCCTTGAAACTGGAGGAGATAGGCTTGGCAGCAAAGGGTTCTATATTCAGCCTACTGTCTTCTCAAATGTCCAGGATAACATGTTGATTGCAAAGGAAGAGATCTTTGGTCCAATGCAATCCATATTAAAATTCAA 1139 0.4425 MGCGNGYLGGRLSKYSTAAAIEQEPIKPSVQVEHTQLLIDGKFVDVASGKTFPTLDPRTGEVIAHVAEGHAEDVDRAVAAARKAFDQGPWPKMPAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFVWKVGPALACGNSIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNIVSGFGPTAGVALASHMDVDKAVELAHFALFFNQGPCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKAGIEQCPQIDSDQFEKILRYIKSGVQNGATLETGGDRLGSKGFYIQPTVFSNVQDNMLIAKEEIFGPMQSILKF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi529g00022 379 FunFam Mitochondrial aldehyde dehydrogenase 2 243 379 - -
Sebi529g00022 379 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 300 IPR016162 GO:0016491
Sebi529g00022 379 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 39 262 - -
Sebi529g00022 379 SUPERFAMILY ALDH-like 30 379 IPR016161 GO:0016491
Sebi529g00022 379 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 19 254 - -
Sebi529g00022 379 Pfam Aldehyde dehydrogenase family 45 254 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi529g00022 Sebi-Chr529 748952 751647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi529g00022 5 379 Aldehyde Dehydrogenase Gene Family AT3G48000 70.476 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi529g00022 K00128 - gmx:100777399 671.389