Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi528g00020 ATGCCTAAGCGTCGTGTCCCGCCTGGGATCTGTGATTTCCCACGACGATGCGGACCCTCCTCTACCAGAATAGGCCCAGACCCCAAACTAAAGTACTTTGGATCACTACCATCAAATGAAGGATACGAACCACTTGAAAACAATGCAGTGCTAACAAAGAATGTTGAAACCAAGAGAATGATTTCTTTTAGGAAAAGGCTATCTTCCTATAGAGACTTCCTTTCTCTCTCTAGGCCAAGCATAAATAAAAACCAGGAGAAGAAGAGGAATAACCGTCTTGACACTCTTTTGAGTCAAGGAGATCACGTGGCACCCGAGAGAGTGAGGGCGACATTGAGGTCGCTCAATACTACTTGTAGAAACTACGCGAAGAAAAGGGTTCCTAGAGTACTTCAGAAAGCGACTAAGGATCTTCAAGTTAAAGCTAAGTTGGTCAACCCTGGGAAACAAATTATAGGATCCGTCCCTAGAGTTGAAGTCGGTGATGAATTCCTATACTGGAGGGAGTTTAACGTTGTTGGCCTTCATCGCCAGATCACCCGTGGCATAGATTATGTGAATGTTAATGGCATGTTGCTTGCTACCAGCGTTGTTTCGGGAGGGGTTTATGATGATGATGTGGAGGATACAAATGAGTTAGTTTATATGGGGGAGGGAGGGAATGTGATAAAGACAGAAAGGAAACCTAAAGATCAGAAACTTAAAAGGGGTAATCTTGCTTTGAAAAACAGTTTCGAGGTTGATAAGTATTGGCATGAGAAATGGTTACATGGTAAGTTGGTTTACAAGTTCAAATTGAAAAGAATGCCTGATCAAGCAGAGGTTCCTTGGAATGAGCTAAAGAAATCTCAAATCCTAGAAGGTAGGGATGGTTTATTTGTCAATGACATTTCTTATGGGAAAAAGTTAATTCCTATATGTGCCATTAATACTGTGGATGATGAAGGGCCACCTATGTTTGTATACATGACTCGCATGGTGTATCCTAATTGGTGCAACCCCATTCTTTATGTGGGGTGTGATTGTGTCGATGGATGCTCTGACTCGGTGAAATGTTCTTGTGTAGAGAGGAATAGGGGCAAAATCCCATTCAATGGGAGAAAGGCTATTGTGGTAGGAAGGCCTAATTGTATAGTCTATGAGTGTGGTCCTTCATGTAAGTGCCCTCCAACATGCCAAAACAGGGTTAGCCAACATAGGATTCAATTTCGGTTTGAAATATTTAAGACCAAGACAAAGGGATGGGGTGTGAGATCCCTTAATAGCATTCCTTCTAGAAGTTTTATATGTGAATATACAGCTTTCGCGATTATCCCTGACATAGGATTGAGTTCTTCTTCCCAAGTAATTGAGCATGGTAACTTCACAATTGATGCTACACACCGTGATCAAGTTTGTGGTGCCGATGGCAATATAAGGAAGAAGGATTGCTATTGCGGTGCTTTGGAGTGTAGTGGCAGGATGTATTGA 1470 0.4218 MPKRRVPPGICDFPRRCGPSSTRIGPDPKLKYFGSLPSNEGYEPLENNAVLTKNVETKRMISFRKRLSSYRDFLSLSRPSINKNQEKKRNNRLDTLLSQGDHVAPERVRATLRSLNTTCRNYAKKRVPRVLQKATKDLQVKAKLVNPGKQIIGSVPRVEVGDEFLYWREFNVVGLHRQITRGIDYVNVNGMLLATSVVSGGVYDDDVEDTNELVYMGEGGNVIKTERKPKDQKLKRGNLALKNSFEVDKYWHEKWLHGKLVYKFKLKRMPDQAEVPWNELKKSQILEGRDGLFVNDISYGKKLIPICAINTVDDEGPPMFVYMTRMVYPNWCNPILYVGCDCVDGCSDSVKCSCVERNRGKIPFNGRKAIVVGRPNCIVYECGPSCKCPPTCQNRVSQHRIQFRFEIFKTKTKGWGVRSLNSIPSRSFICEYTAFAIIPDIGLSSSSQVIEHGNFTIDATHRDQVCGADGNIRKKDCYCGALECSGRMY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi528g00020 489 Gene3D - 246 288 IPR036987 -
Sebi528g00020 489 SUPERFAMILY PUA domain-like 147 281 IPR015947 -
Sebi528g00020 489 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 81 461 - -
Sebi528g00020 489 Gene3D SET domain 289 440 IPR046341 -
Sebi528g00020 489 Pfam SAD/SRA domain 152 246 IPR003105 -
Sebi528g00020 489 ProSiteProfiles Post-SET domain profile. 473 489 IPR003616 -
Sebi528g00020 489 SMART preset_2 294 387 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi528g00020 489 SMART G9a_1 148 272 IPR003105 -
Sebi528g00020 489 Pfam Pre-SET motif 297 395 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi528g00020 489 ProSiteProfiles YDG domain profile. 153 301 IPR003105 -
Sebi528g00020 489 Gene3D - 134 245 IPR036987 -
Sebi528g00020 489 SUPERFAMILY SET domain 292 461 IPR046341 -
Sebi528g00020 489 ProSiteProfiles Pre-SET domain profile. 338 400 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi528g00020 Sebi-Chr528 339263 341078 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi528g00020 78 434 Su(var)3-9 homologs AT1G73100 33.251 7.52e-58 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi528g00020 K11420 - lang:109363359 436.032