Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi528g00019 ATGACGTCAGGGTTGACTGGAGGAGTTTGCAACAAGGTGTATGTGGTTATGCGAAATTCTAATACTGCCCCGGGGATGAAATTGAAAAAATTGTGGAAATATGGTCAGCAGAGATTTTCCCTTCGCAATTGTAGCGTGTTAAGGAAGACATCCGAACTTGTAGCTTGTGAAGGAAGCCTTAGACGAGAGGAGACGAGACGAGAGTTGACGCGTTTGGCTGCCGGAGTGGGTGATTTCTTTTGCTGTCGACGGAAACGGAGTTGTGGTAGTGGTCGTTTAAGCAGTAACAACCGAGATGAGTCACGTAATGGGGATGGAAACCCGGTGGGAGACCAAGGTGGGCTGTCATGGGGCGGGAGGATGATACATGAACTAACACATGATGACATTAGACGTCTAGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGGATTATGCTAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCGAAATGAGAATGGTGATATTGTTAAGCGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGGAGAGAAAGGACAGAGTGAAGGAGGCGAGGCCAATTACTCGTGTGCAGTGCACAACAAGGATGCGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACGATCATAACCATGAGTTAACTCCTCCAACGTATGTTCACATGATGTCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAATTGATACCCTGCATGCAGCCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGGAAAGTATAA 858 0.451 MTSGLTGGVCNKVYVVMRNSNTAPGMKLKKLWKYGQQRFSLRNCSVLRKTSELVACEGSLRREETRRELTRLAAGVGDFFCCRRKRSCGSGRLSSNNRDESRNGDGNPVGDQGGLSWGGRMIHELTHDDIRRLEFGSEGEAYSFYSDYAKQRGFAVRKDDIERNENGDIVKRYLVCNKEGTRDKKHLERKDRVKEARPITRVQCTTRMRVYLDMRSGKWKVSAFHDDHNHELTPPTYVHMMSAYRRLSESDKAQIDTLHAAGVRTCHIMSFMIGQKGGHGELGKV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi528g00019 285 Pfam FAR1 DNA-binding domain 143 233 IPR004330 -
Sebi528g00019 285 MobiDBLite consensus disorder prediction 89 115 - -
Sebi528g00019 285 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 114 277 - -
Sebi528g00019 285 MobiDBLite consensus disorder prediction 89 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi528g00019 Sebi-Chr528 323344 324640 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi528g00019 FAR1 8.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi528g00019 - - ccaj:109792835 200.675