Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi528g00013 ATGAGCCCACTGTTGCTGCACTCATATGGCCTTGACAAGAGAACCCAAAGAAAAAGACACAGAACTAATTGTGTTGTTGGAGAGCGAAATGTTTTCGTATTTGACCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTTACAATTAAGGATAAGGTCTTCCAAGTTAAGGCCACTGCTGGACACACCCACCTTGGAGGAGAGGACTTTGATAACAGAATGGTGAATTACTTTGTTTGCGAGTTCAAGAGGAAAAACAAAATTGACATTAGTGGTAACCCAAGAGCCCTGAGGAGATTGAGAACTGCCTGCGAGAGAGCAAAAAGGACTCTATCTTTTGCTGTTGTTACCACCATCGAGGTAGATGCTTTATTTGAGGGGATTGATTTGTGTTCATCAATCACTCGCGCTAGGTTTGAGGAACTCAACATGGATCTCTTTACAAAGTGTATGGAGACAGTTGAGAGGTGTCTTAAGGATTCTAAGATGGAAAAAAATAATATACATGATATTGTTCTTGTTGGTGGTTCTTCTAAGATTCCCAAAGTGCAGCAGCTAATACAGGACTTCTTCAAGGGGAAGGAACTCTGCAAGAGCATCAATCCTGATGAGGCTGTTGCTTATGGAGCAGCTGTCCAGGCTGCTTTGTTGAATAAAAGGACTAAGTTTGTTCCAAAGTTAGTGCTATTGGATGTTACACCACTTTCACTTGGTATATTTACAAAGGGAGATCTCATGAGTGTAGTGATTCCTAGGAATACTACAATTCCTGTAAAGAAGAAAAAAGCATACTTCACAAGTAAAGATTACAAATCCAGTGTCCTGATTGAGGTATATGAGGGTGAGAGGACAAGGGCCAGTGATAATAACTTACTTGGTTCGTTTAATCTTTGTGGCATTCCTGCTGCTCCTCGAGGCCATCCTTTAAATGTATGCTTTGACATAGATGCTGATGGAATCCTAAACGTATCTGCTGAGGAAGAAACCACTGGTAGCAAGAATGAAATTACCATAACCAATGACAAAGGAAGACTATCAACTCGACAAATTAGGAGATTGATTCGAGAATCTGAGAAATACAAAGCTGAAGATAAAAAGTACCAGAAGAAAGTTAAAGCAATGAATGCTTTGGATGATTACATTTACAAGATGAGGAATTAA 1158 0.4007 MSPLLLHSYGLDKRTQRKRHRTNCVVGERNVFVFDLGGGTFDVSLLTIKDKVFQVKATAGHTHLGGEDFDNRMVNYFVCEFKRKNKIDISGNPRALRRLRTACERAKRTLSFAVVTTIEVDALFEGIDLCSSITRARFEELNMDLFTKCMETVERCLKDSKMEKNNIHDIVLVGGSSKIPKVQQLIQDFFKGKELCKSINPDEAVAYGAAVQAALLNKRTKFVPKLVLLDVTPLSLGIFTKGDLMSVVIPRNTTIPVKKKKAYFTSKDYKSSVLIEVYEGERTRASDNNLLGSFNLCGIPAAPRGHPLNVCFDIDADGILNVSAEEETTGSKNEITITNDKGRLSTRQIRRLIRESEKYKAEDKKYQKKVKAMNALDDYIYKMRN 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi528g00013 385 Gene3D - 14 196 - -
Sebi528g00013 385 ProSitePatterns Heat shock hsp70 proteins family signature 3. 170 184 IPR018181 -
Sebi528g00013 385 Gene3D - 8 214 - -
Sebi528g00013 385 PRINTS 70kDa heat shock protein signature 305 321 - -
Sebi528g00013 385 PRINTS 70kDa heat shock protein signature 225 244 - -
Sebi528g00013 385 PRINTS 70kDa heat shock protein signature 39 49 - -
Sebi528g00013 385 PRINTS 70kDa heat shock protein signature 199 219 - -
Sebi528g00013 385 PRINTS 70kDa heat shock protein signature 167 183 - -
Sebi528g00013 385 Gene3D Actin; Chain A, domain 4 66 148 - -
Sebi528g00013 385 Pfam Hsp70 protein 8 384 IPR013126 GO:0005524|GO:0140662
Sebi528g00013 385 SUPERFAMILY Actin-like ATPase domain 27 216 IPR043129 -
Sebi528g00013 385 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 225 377 IPR029047 -
Sebi528g00013 385 Coils Coil 349 369 - -
Sebi528g00013 385 ProSitePatterns Heat shock hsp70 proteins family signature 2. 33 46 IPR018181 -
Sebi528g00013 385 FunFam Heat shock 70 kDa 65 148 - -
Sebi528g00013 385 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 215 385 IPR029047 -
Sebi528g00013 385 FunFam Heat shock 70 kDa 220 373 - -
Sebi528g00013 385 PANTHER HEAT SHOCK PROTEIN 70KDA 8 385 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi528g00013 Sebi-Chr528 208898 210055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi528g00013 8 385 Calmodulin-binding Proteins AT3G12580 69.474 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi528g00013 K03283 - gmx:102667578 558.525