Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi527g00018 ATGGTAGCACCCTATGTTCATCGCGCAAGTCACCTCGCAAAGCTTCGTCGCTCGCCGGCAACTACCTCTCTTCACCTTTCGTCGTCGGCAGTAGCGCCTCAATCGTACAACCTCTCTGCATCCATCACCGGCAGTAGCGCTCCATCACCGCCGTCATTGAGAAACAACAATGGAGGTAAATGTCTAAAAAAGAAGCAGGATTCGTGGAAGGGCATGGATGGACCCCCGAACCCAATGGTAACGCCTCTGCTCATGGATCTCTATCAATTCCCCATGGCTTACGCTTATTGGAAAGCTGGCAAGCCTCAAGAACGTGTTGTGTTCAATTTGTATTTTCGGAAGAATCCCTTTGGAGGGGAGTATGTTGTCTTCGACTGTTTAGAAGAATGTGTAAGATGCTGCTTTAGCTATGAAGTAAGCATGGGGCCTTTGATTGAAGAGCAAAGGCTGAGATGTTATTCCAGTCATTGCAAAGTATTTCTGGACTCCTCTCTAATGTTAGTATTTCCGGACTCCGCTACCATTGTGAGTGAACAAGAAGCTTTGCAAAATAACAACTCAAAAAGAGGTTTGGATGTTGTGAATAATATCAAGACAGCTGTGGAAAAAGCTTGTCCTGGCATAGTTTCCTGTGCTGATATTCTTGCCCTTGCTGCTGTGGTATCTTCTGCTCTGGTGACTGCTTGGTGCAGAGGGTGTGCCCATTATGCTACCATTTTGCTCTCAATTCCCTCAACCAGGATCGTGTCACTCCCAGTTCAGGTCGCACAATTCCGGATTTTCATTGGAGGAAATTATGGAAAAACCCAAATCAGCAAAAGGTGTTACACTTCATTTGGAGACTACTGCACTGATCCCTCCCTGTTCGAGCAAACCTGCTGCGGCGAGGAATTCAATGCCCATCCATCTGCCCGTGGTGTGCTGCCGAAACTGAAATAG 939 0.4718 MVAPYVHRASHLAKLRRSPATTSLHLSSSAVAPQSYNLSASITGSSAPSPPSLRNNNGGKCLKKKQDSWKGMDGPPNPMVTPLLMDLYQFPMAYAYWKAGKPQERVVFNLYFRKNPFGGEYVVFDCLEECVRCCFSYEVSMGPLIEEQRLRCYSSHCKVFLDSSLMLVFPDSATIVSEQEALQNNNSKRGLDVVNNIKTAVEKACPGIVSCADILALAAVVSSALVTAWCRGCAHYATILLSIPSTRIVSLPVQVAQFRIFIGGNYGKTQISKRCYTSFGDYCTDPSLFEQTCCGEEFNAHPSARGVLPKLK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi527g00018 312 Pfam Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain 83 132 IPR040727 -
Sebi527g00018 312 SUPERFAMILY Nicotinate/Quinolinate PRTase N-terminal domain-like 70 133 - -
Sebi527g00018 312 PRINTS Plant peroxidase signature 189 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi527g00018 312 PRINTS Plant peroxidase signature 208 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi527g00018 312 PANTHER NICOTINATE PHOSPHORIBOSYLTRANSFERASE 73 134 IPR007229 GO:0004516
Sebi527g00018 312 Gene3D - 161 233 - -
Sebi527g00018 312 SUPERFAMILY Heme-dependent peroxidases 170 226 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi527g00018 312 Gene3D nicotinate phosphoribosyltransferase 72 144 - -
Sebi527g00018 312 ProSiteProfiles Plant heme peroxidase family profile. 127 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi527g00018 312 Pfam Peroxidase 167 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi527g00018 Sebi-Chr527 643076 646628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi527g00018 123 219 Peroxidase AT5G05340 43.878 2.19e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi527g00018 K00763 - gmx:100796825 114.775