Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi527g00010 ATGGCTAGGAGTTGGGTTATTGACATTGGAGGATTTGCAAAGAAAGTGAAAAACACTACTCTGTCAACAGATGATCAAATCAAGGACTGTGGAGCATTTCGTGAATGCCCAAAATGTCACTATCATATTGATAACAGCGATGTTTCTCCTGAGTGGCCTGGATTTCCTGCTGGTGTAAAGTTTGATCCTTCTGATGTTGAACTTATAGAACATTTAGCAGCAAAGTGTGGCATTGGAAACAGAGAGCCACACATGTTTATCCATGAGTTCATCCCAACTCTGGAAGGAGACAAAGGTATTTGCTACACACATCCAGAAAAACTTCCAGGTGCTAAGAAGGATGGCAGCAGTGTTCATTTCTTCCACAAAACAGTTTATGCTTATGCTACTGGACAAAGAAAGCGTAGAAAGATCCATCATAATGGTTTGAATGAGGAGCATGTCCGCTGGCACAAGACTGGTAAGACCAAAGCTATAATAGAAGATGGAGTACATAAGGGCTTTAAGAAGATCATGGTTCTTTATGTAAGATCTAAGAAAGGATCTAAGCCAGAAAAGTCCAATTGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGATGAGAAGGATGGTGAGTATGTTGTTTCAAAAATCTTTTATCAACAGCAGAAACAGACTGAGAAAATTGAGGAGATTCCAGTAGTTGAAGATTCGGACATGGCATTAAGAACTAGTCCAAGAACCCCAAAACCAAATCCCCCCACTCGACCTCTAACAGGCAAATGTGTTGACTATGATGACAATTTTGATGAAAATGAACTTCCATCATTCATCCAGGATGCTAAGCCTATACCTGAAGAATCACATGCTCCACCATCTGATGTTAAGAATGAGGAAAATATAGGCGACCCTGCATGTTTAGCTGGTGAATCACAGGCTGACTGTGACTTTGATGGTTTGGATGATATCTTATTATGCAAGGAGATGTTAGATTCTTCTGCTGTCATAAATGATTCTGGATTGAACTCCACTTTTAATAGCTTTGCTTGCAATGAAAATGAGGCATTTTATGGAATTCCTGTCTTGGACACCTTGGAATTGGATACTCCTCCAGATTTTGATCTTTCTAATTTGCAATTTTGTTCTCAAGACAGTAGTATCCTTCAGTGGATGGGCAGATTATGA 1167 0.3993 MARSWVIDIGGFAKKVKNTTLSTDDQIKDCGAFRECPKCHYHIDNSDVSPEWPGFPAGVKFDPSDVELIEHLAAKCGIGNREPHMFIHEFIPTLEGDKGICYTHPEKLPGAKKDGSSVHFFHKTVYAYATGQRKRRKIHHNGLNEEHVRWHKTGKTKAIIEDGVHKGFKKIMVLYVRSKKGSKPEKSNWVMHQYHLGSEEDEKDGEYVVSKIFYQQQKQTEKIEEIPVVEDSDMALRTSPRTPKPNPPTRPLTGKCVDYDDNFDENELPSFIQDAKPIPEESHAPPSDVKNEENIGDPACLAGESQADCDFDGLDDILLCKEMLDSSAVINDSGLNSTFNSFACNENEAFYGIPVLDTLELDTPPDFDLSNLQFCSQDSSILQWMGRL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi527g00010 388 Gene3D NAC domain 64 220 IPR036093 GO:0003677|GO:0006355
Sebi527g00010 388 ProSiteProfiles NAC domain profile. 55 215 IPR003441 GO:0003677|GO:0006355
Sebi527g00010 388 FunFam NAC domain-containing protein 8 64 219 - -
Sebi527g00010 388 SUPERFAMILY NAC domain 39 215 IPR036093 GO:0003677|GO:0006355
Sebi527g00010 388 MobiDBLite consensus disorder prediction 232 254 - -
Sebi527g00010 388 Pfam No apical meristem (NAM) protein 56 196 IPR003441 GO:0003677|GO:0006355
Sebi527g00010 388 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 287 IPR044799 GO:0003700
Sebi527g00010 388 MobiDBLite consensus disorder prediction 272 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi527g00010 Sebi-Chr527 479712 482927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi527g00010 24 227 NAC Transcription Factor Family AT1G28470 53.810 9.55e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi527g00010 NAM 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi527g00010 - - gmx:100780662 613.224