Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi526g00043 ATGACCAGGCTGCAGAAAGCTCGCAAAGTACTTCTAAAGTTCAAATTCAATATCGATGACCCAACTCGATACTTGAAGAACTGGAACAAAAGTACAGACACATGTAGCTTTAACGGGATTCGATGTGCCACATTTCCAAATACAAAAAATGAGAGAGCAGTTGCAGGATTGGACCTGAATGGAGCCAGGCTCTCTAGGGCCAAGGGTAGATCACCACTGAGCCTCTCCGGTATCTTGGACAAGATACCGGAGCTTACATTCTTCCACGTAAACTCTAACAACTTCACCGGTGACATCCCAAAGGAAATCCTCAAGTACAAGTACTTCTTCGAGTTAGACCTCAGTAACAACAAAATTCAGGGCGAGTTTCCGAAGGAAGTGCTTCAGTTGAAGCAACTGGTGTTCCTGGACCTCAGGTTCAACCATCTCTATGGCCCAATCCCACCAGAACTGTTTGGGTTGGATTTGGATGTGATTTTCATCAACGACAATAAGTTCAGCGGTCCTCTCCCTGATAATTTTGGGTCCACACCAGCCAGGTACCTCACTTTTGCAAACAACAAACTCACGGGTCAAATCCCCAGAAGCATTGGGAAAGCTTCCAAAACCCTCACGGAAGTGCTCTTCTTGGGCAATTACTTTGAAGGGTGCTTGCCCTTCGAAATTGGGTACCTCAAGAAGGCCACCGTCTTTGATGTCAGCAGAAACTGGCTAACTGGTCCCATCCCACACTCATTTGCCTGCTTGCAAAGCATTCAGTATCTCAATTTGGAGAGGAACCAGTTTTACGGAACTGTTCCGGAGATGGTGTGTCAACTACCAGGACTCCGCAATAATGGCAACCTCTCCCTAGCGGACAACTACTTCACGCAGGTGGGTCCTGCCTGCAGAGACCTCATAAAGGCCAAGGTGCTCGACGTCTCCAACAACTGCATCCTCGGCCTTCCAAATCAAAGATCATATGGAGAATGCGCTAAATTTTTCTACAACGCCAAGCAATGCCCAAATCCCAACTCATTCAATTACATCCCTTGTAAGCTCAAGAAAGGACACAACTACCAAGCCCAGGCCCAGGCCCAGACACCCCCTCCTGCCCCGCTAACTTACAAGTCTCTCAAACCTCATCGCCTCTGA 1134 0.478 MTRLQKARKVLLKFKFNIDDPTRYLKNWNKSTDTCSFNGIRCATFPNTKNERAVAGLDLNGARLSRAKGRSPLSLSGILDKIPELTFFHVNSNNFTGDIPKEILKYKYFFELDLSNNKIQGEFPKEVLQLKQLVFLDLRFNHLYGPIPPELFGLDLDVIFINDNKFSGPLPDNFGSTPARYLTFANNKLTGQIPRSIGKASKTLTEVLFLGNYFEGCLPFEIGYLKKATVFDVSRNWLTGPIPHSFACLQSIQYLNLERNQFYGTVPEMVCQLPGLRNNGNLSLADNYFTQVGPACRDLIKAKVLDVSNNCILGLPNQRSYGECAKFFYNAKQCPNPNSFNYIPCKLKKGHNYQAQAQAQTPPPAPLTYKSLKPHRL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi526g00043 377 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 3 363 - -
Sebi526g00043 377 MobiDBLite consensus disorder prediction 354 377 - -
Sebi526g00043 377 Pfam Leucine rich repeat N-terminal domain 7 42 IPR013210 -
Sebi526g00043 377 SUPERFAMILY L domain-like 7 315 - -
Sebi526g00043 377 Gene3D Ribonuclease Inhibitor 4 179 IPR032675 -
Sebi526g00043 377 Gene3D Ribonuclease Inhibitor 180 332 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi526g00043 Sebi-Chr526 524515 525648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi526g00043 3 334 Trihelix Transcription Factor Family AT1G12040 41.317 2.25e-76 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi526g00043 - - gmx:100781083 544.273