LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi526g00040	ATGGATAATACAGATGATCTTTCGGCTGTTAAGTTGGATGATGAGAATGACCCTAGTTATGATGTTGGTCATGATGATAGTATTAGTGCAGATCCGTCGGATATTAGAGAAGAGAGCCAGGCTGCAGATATGGATGTTGGAGATGGACAGTATAAGAGGATAACAAATTTGACCAGTGATGATGTAATGGGTTTGGAGTTTGTAACTCAATATGTTGCTTTCAAATTTTATGAGGATTATGCTAAAGCCCATGGTTTTGTAGTAAGGAAGGATGATATAAGGAAGGATTTTAGGGGTAATACTGTGATGCGACAATTTGTATGCAATAGACAAGGATTGAGAAATAAAAAGCACTTCATGAGGGTAGACAGGAAAAGGGAGCACAGAGCAATAACCCGAACAAATTGTGGAGCTAAGCCTCGTGAGGCACATAATCACGAGCTAACCCCTTCAGTATATGTGCATTTATATCCTGCTTATCGTAAAATGAGTGATGCAGATAAAGCTCAAGTTGATAGTTTACGTGCCCATGGTGTTAGAACTTGTCACATTATTGGTTACATGTTGGCCCAAAAAGGCGGATATGGGGGTTTGGATTTTTGTAAAACAGATGTATACAACTATATTGACAGCAAAAGTCGTGTGCAGGTAAAAGATGGTGATGCAATTGCTGCTTTAAGCTATTTAGCAGATGGTGATGGTGCCATGAGAGAGGCTAAGATGAAGGATTTTCCAACCTATCCCCCCAAACACAAAACTAGGGTCAGTGCATCATTCCTGTTTTAA	786	0.3969	MDNTDDLSAVKLDDENDPSYDVGHDDSISADPSDIREESQAADMDVGDGQYKRITNLTSDDVMGLEFVTQYVAFKFYEDYAKAHGFVVRKDDIRKDFRGNTVMRQFVCNRQGLRNKKHFMRVDRKREHRAITRTNCGAKPREAHNHELTPSVYVHLYPAYRKMSDADKAQVDSLRAHGVRTCHIIGYMLAQKGGYGGLDFCKTDVYNYIDSKSRVQVKDGDAIAALSYLADGDGAMREAKMKDFPTYPPKHKTRVSASFLF	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi526g00040	261	PANTHER	OS01G0519700 PROTEIN	62	254	-	-
	Sebi526g00040	261	MobiDBLite	consensus disorder prediction	1	44	-	-
	Sebi526g00040	261	MobiDBLite	consensus disorder prediction	1	43	-	-
	Sebi526g00040	261	Pfam	FAR1 DNA-binding domain	75	139	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi526g00040	Sebi-Chr526	472285	473437	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi526g00040		FAR1	3.1e-12	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi526g00040	-		-	ccaj:109792835	274.633