Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi526g00033 ATGGCCGTCACTCAAGCCAACTCCTCCCTCGAGGATCAGAGCCAAGTCTTTGTGTCCCCTTCCACCACTTACGTTGGCGTTTATGACGGCCATGGCGGCCCCGAAGCTTCTAGATTCGTCGCCAATCGTCTCCTTCCTTATTTGCACAGATTGAGTAGCGAAGAAGGGGGTGTATCAGTGGATGTGATAAAAAAGGGATTTAGTGCGACGGAGGAAGAATTCTTGCATTTGGTGAAGCGATGTTTGCCCATAAGCCCCCATCTTGGTTCCGTGGGATCCTGCTGCCTTGTTGGTGCCATTTCTTCTGATAATAATGTTTTGTATGTTGCCAACCTCGGAGACTCCAGAGCAGTCCTTGGCAAGACAAACTCCAAGGCAGAGCGCTTATCAGTCGATCATAATGTCTCTGATGAGGAGATCAGGAAAGAGGTCGAAGCTCTTCATCCTCATGATTCACACGTTGTTCTTCATACCCGTGGTGTCTGGAGGATTAAGGGCATCATACAGGTGTCAAGATCTATTGGTGATGTGTATCTCAAGAGACCTGACTTCTACAGAGACCCGGTTTTTCAGCAATTTGGAAATCCCATTCCTTTGACTCTGACTCGTCCTGTAATGACAGCTGAACCTTCCATCACTGTTAGGGAGCTTCAACCGGAAGATCTCTTCCTCATATTTGCATCCGACGGACTCTGGGAACAATTAACTGATCAAGAAGCGGTTGACATTGTTTTCAAATATCCCAGAGCTGGAATTGCCAAAAGATTAGTGAGAGCTGCTCTTCAAGTAGCTGCAAAGAAGAAAGAGATCAGATATGATGACTTAAAGAAGATTGACAAGGGAATCAGACGGAATTTTCATGATGATATCACTGTTGTTGTCATCTATCTTGATCACCACAACCACTCTAAGCATCGCTCTACAACTGCTCCTGTTGACATTTACTCCCCAGACGACGAGGAAGCAGAACAGTGTATGCTCGCCGCAGCTGCCTAA 996 0.4659 MAVTQANSSLEDQSQVFVSPSTTYVGVYDGHGGPEASRFVANRLLPYLHRLSSEEGGVSVDVIKKGFSATEEEFLHLVKRCLPISPHLGSVGSCCLVGAISSDNNVLYVANLGDSRAVLGKTNSKAERLSVDHNVSDEEIRKEVEALHPHDSHVVLHTRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQQFGNPIPLTLTRPVMTAEPSITVRELQPEDLFLIFASDGLWEQLTDQEAVDIVFKYPRAGIAKRLVRAALQVAAKKKEIRYDDLKKIDKGIRRNFHDDITVVVIYLDHHNHSKHRSTTAPVDIYSPDDEEAEQCMLAAAA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi526g00033 331 SUPERFAMILY PP2C-like 7 299 IPR036457 -
Sebi526g00033 331 SMART PP2C_4 1 295 IPR001932 -
Sebi526g00033 331 CDD PP2Cc 5 297 IPR001932 -
Sebi526g00033 331 FunFam Probable protein phosphatase 2C 42 1 305 - -
Sebi526g00033 331 ProSitePatterns PPM-type phosphatase domain signature. 24 32 IPR000222 GO:0043169
Sebi526g00033 331 Pfam Protein phosphatase 2C 21 266 IPR001932 -
Sebi526g00033 331 Gene3D - 1 309 IPR036457 -
Sebi526g00033 331 PANTHER PROTEIN PHOSPHATASE 5 298 IPR015655 GO:0004722|GO:0006470
Sebi526g00033 331 ProSiteProfiles PPM-type phosphatase domain profile. 1 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi526g00033 Sebi-Chr526 369779 370968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi526g00033 1 298 PP2C-type Phosphatase Gene Family AT3G51370 55.305 1.32e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi526g00033 - K01102 gmx:100812137 495.352