Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi526g00008 ATGGTTACCTCAAAACATTATTACTGGGCAACTCTGTTTGGGTTGCTAAGCCTTGCATCACAAGCAGTTCCTTCTCCTACTTACATCGGTTCTCACTGCAACAACAACACCACATACGCACCCAACAGCACACTGGCTGTCAATCTCAATGTTCTCCTCTATTCTCTCACCACCAACTCCTCCCAACAACAAGACGGTTACTATTTGACCATCATGGGCTTTGGAACCACCGACGCTGTCAACGGCATCTTTCTCTGCCGCGGCGACATCAACACCACCGTCTGTCAACAGTGTGTAACCACCGCCGCCAAAGAGATAACACGCCACTGCCCCAACCAAACGGAGGCCGTTATCTGGTACCAGGAGTGTTTGTTGCGTTACACAAACAAGTACTTCAAGTACTACAGCATCGAACCAAGATTGAACCCCATGGATGGCAACAACATCTCTGCCGTTGACTTTGAACGGTTCAACCAATCAGTTTTCACCTTGTTGAATGAGTTGGCAACGGAAGCGGCGAATTCACTGTCGGCCAAGAAGTTCGCCACCGGGGAACTGGAAGTGACGAAGTCTCAGACGGTTTATGGATCGGCGCAGTGCAGCACCGATTTAACGAGTGGTCAGTGTGAGATATGTTTACGAAACGCCATCGGAACTCTTCCCGCGTGCTGCAGCGCCAAACAGGGCGCAAGTGCTCTGCTTGCGTCCTGTATTGTCAGATACGAACCCTACCCATTTTACAATATAACTGGGACGCCTTCACCATCTTCTTCAGGATGCTATTGCCGGCGGAGGAGATTGAAGCAGAGACTTAGGACAATTCTAAAGGAAAATTTTGGGGATGAACTGAAAACTTTGGAATCATTACAATTCACTTTGGCTACAATTGAAGCTGCCACAAACAAGTTTTCTCATGAGAATAAAATTGGCAGAGGAGGATTTGGTGTTGTCTACAAGGGTATTCTCTCTGATGGACGACAAATAGCAGCAAAGAAACTTTCAAGAAGCTCCGGACAAGGTTCAATAGAATTTAAAAATGAAATTTTATTAATAGCTAAACTTCAACACAGAAATTTGGTGACCTTATTAGGATTCTGCTTGGAAGAACAAGAGAAAATGCTTATATATGAGTATGTGCCAAACAAGAGCCTCGATCACTTTCTATTCGAATATGCAATGCATGGACAGTTTTCTGAGAAGTCAGATGTATTCAGTTTTGGAGTCATAGTTCTTGAGATAGTTAGTGCAAAGAGAAATGCTCGTCCAATTGAATCACAAGATTTTGAAGATCTCTTAAGCATTGTGAGTATTGAAATCTAA 1320 0.4432 MVTSKHYYWATLFGLLSLASQAVPSPTYIGSHCNNNTTYAPNSTLAVNLNVLLYSLTTNSSQQQDGYYLTIMGFGTTDAVNGIFLCRGDINTTVCQQCVTTAAKEITRHCPNQTEAVIWYQECLLRYTNKYFKYYSIEPRLNPMDGNNISAVDFERFNQSVFTLLNELATEAANSLSAKKFATGELEVTKSQTVYGSAQCSTDLTSGQCEICLRNAIGTLPACCSAKQGASALLASCIVRYEPYPFYNITGTPSPSSSGCYCRRRRLKQRLRTILKENFGDELKTLESLQFTLATIEAATNKFSHENKIGRGGFGVVYKGILSDGRQIAAKKLSRSSGQGSIEFKNEILLIAKLQHRNLVTLLGFCLEEQEKMLIYEYVPNKSLDHFLFEYAMHGQFSEKSDVFSFGVIVLEIVSAKRNARPIESQDFEDLLSIVSIEI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi526g00008 439 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Sebi526g00008 439 Gene3D Phosphorylase Kinase; domain 1 265 377 - -
Sebi526g00008 439 SUPERFAMILY Protein kinase-like (PK-like) 282 419 IPR011009 -
Sebi526g00008 439 ProSiteProfiles Gnk2-homologous domain profile. 137 246 IPR002902 -
Sebi526g00008 439 ProSiteProfiles Protein kinase domain profile. 303 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi526g00008 439 Pfam Salt stress response/antifungal 154 243 IPR002902 -
Sebi526g00008 439 Pfam Salt stress response/antifungal 33 129 IPR002902 -
Sebi526g00008 439 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 390 423 - -
Sebi526g00008 439 Gene3D Transferase(Phosphotransferase) domain 1 378 437 - -
Sebi526g00008 439 Gene3D - 143 246 IPR038408 -
Sebi526g00008 439 Gene3D - 26 132 IPR038408 -
Sebi526g00008 439 ProSitePatterns Protein kinases ATP-binding region signature. 309 332 IPR017441 GO:0005524
Sebi526g00008 439 FunFam Cysteine-rich receptor-like protein kinase 10 140 246 - -
Sebi526g00008 439 Pfam Protein kinase domain 304 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi526g00008 439 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 132 - -
Sebi526g00008 439 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 263 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi526g00008 Sebi-Chr526 89363 91764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi526g00008 390 435 Receptor kinase-like Gene Family AT4G05200 50.000 5.32e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi526g00008 Pkinase 9.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi526g00008 - - cam:101500396 588.571