Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi526g00007 ATGAATGTGTCATCAATTCCAGTTGCTGAAGGTGTAGAGAAATGGGTCAACGATATTCACAACAATATTGTGCAACATGGAAAAGAATGTGTTGTTGACTATGCACCACAATTGGGAATGGAGTTTGAATCAGAGGTTGTGGCCTATAAATTTTACAATGAGTATAGTAAGAGAGTTGGGTTTGGTATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGACGGAATTTTGACTTCAAGAAGATTCTCATGCTTCAAGGAGGGTAAACGAAGCGTTGACAAACGTGACCACTTGACAAAAGAGCCTAGAGCAGAAACCAGAACAGGATGTGAAGCACATTTTGAAGCATGCATTGATCTACATGAGGAGGAAGGTGAATTTCTGAATGCATGGAATGATTTACTTGTTGATCATAATGTTTCCGATGACTCATGGCTACATGGGATTTTTCGAGTGAAGGAAAAGTGGGCATGGGCTTATGTTCGAAAAACTTTCACGGCAGATAGAGCATCTGAATCTCATGAAACATATACCTTTTTGTCCAAAGTTTGTGAAGAGTCCAACAAAATAATTAATGTTATGTTGGCTGCAACATCTATGGGTGGAGAATCAATGGGAAAGTGTGATGTATCCATATCAATTGCAAATGAGAAAATTGACAACAATGTGAACAACATTGATTTTGGTGGGGCGAAAGGCATAAAGAAGCGAGATTCCTCACATAAGGGTAAAAAACGACCTAAATCTTGGGTTGAGAAGTTGGCTCGAAAAAGAAAGGCAAACCTAGCACAAAAAAAGAGAAAGACTCAAGAAAATTTGGAACAATTTGTAGCAACAAGTGATGGTATACATTCTTTTGATACAAGTCATACTTTTACTCAGTTGTTAACACAACCACTACACTGCATGCCAATTTCTCAAACTTCGGATCATATAAATGAGAGTGGTAGTCAATATGGAAGTGGGATCCAAGTTTTGAATGCAAGTCAACCTGAGAATGTAAGACTTTATCTGAATTTAAATGAAGCTGACAATGGAAATCAACATGGGAATACAATCCAAATGACACAATCAAGTCAAGTTCAAGGTGCATTAGACCTACACAACTTCATCTAG 1116 0.3754 MNVSSIPVAEGVEKWVNDIHNNIVQHGKECVVDYAPQLGMEFESEVVAYKFYNEYSKRVGFGIRREYGNKSKKDGILTSRRFSCFKEGKRSVDKRDHLTKEPRAETRTGCEAHFEACIDLHEEEGEFLNAWNDLLVDHNVSDDSWLHGIFRVKEKWAWAYVRKTFTADRASESHETYTFLSKVCEESNKIINVMLAATSMGGESMGKCDVSISIANEKIDNNVNNIDFGGAKGIKKRDSSHKGKKRPKSWVEKLARKRKANLAQKKRKTQENLEQFVATSDGIHSFDTSHTFTQLLTQPLHCMPISQTSDHINESGSQYGSGIQVLNASQPENVRLYLNLNEADNGNQHGNTIQMTQSSQVQGALDLHNFI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi526g00007 371 Coils Coil 259 279 - -
Sebi526g00007 371 MobiDBLite consensus disorder prediction 230 249 - -
Sebi526g00007 371 Pfam FAR1 DNA-binding domain 50 115 IPR004330 -
Sebi526g00007 371 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi526g00007 Sebi-Chr526 81533 84305 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi526g00007 FAR1 9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi526g00007 - K17604 psat:127085847 171.014