Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi526g00001 ATGACAAGTGCATTGACATATTATCTATTAGTGGCGTTGTTGTTTGGATTCATCCATCATCTGTGTGAGGGTCAACAACCTGAGGCTCTCCCTCCAGCAGCAGAGACCTGTAACGGAGTTTTCATTTCCTATGACTTCATTGGCAGAAGGAAGGAATTCCCTCGCCTCAAGAACGTCACTGCCCAATCTTGGGCCTTCAAAGCCACCGCAACAGTCCTCAACGCAGGCTCCGAGGTAGTTAAATCATGGAAGTTGTTCATCGGCTTTCAACATAAAGAGATTCTAGTCTCTGCCACCGGAGCTGTTCTCATCGATGGAGGTGACCTCCCTGCTTCTGTTGAAAACGGGACTACCTTGGCTGGAGCTTCTCTCCCAGATTTAGAAACCTCCATCGACACAGCCGAGAGTTCTATGTGGGCGTGTTGTAAAAAAGACCCCAAATTCAAGTCGAAACTTCCCAAGACAAAATTCTTGCCGCGGCAGAAAGGGGATCTTACCATATCCTATGACGTTCTTCAAGTGTATGACAATAACTATCTTGTTCAAGTGACGATGGAGAATCACAACCCTTTAGGACGCCTAGATCGTTGGAACTTGACGTGGGAGTGGATGAGAGGGGAATTCATATACAACATGAAAGGCGCTTTCACGCGTGAGGTAGAGTACTCAGGTTGCATCCATGGTGCCGCAGGAGAGTACTACAGGGATATGGATTTCTCTAAAGTCCTCAACTGTCAAAAACATCCCATAATCAGTGACCTTCCTCCAGAGAAATACAACGACACCGACATTGGAAAAATACCTTTCTGTTGCAGAAACGGCACTCTTTTACCTACACTCATGGATTCAACTCAATCCAAGTCAGTTTTCCAGATGCAGGTGTTTAAAGTTCCACCTGATATGAATAAATCAGCTATTTACCCTCCAGAGAAGTGGAAAATCATGGGAGTTCTCAACCCGGATTACAAATGTGGTGCACCTCTCAGAGTGGAACCTTCTAGATTTCCTGAACCCAGGGGACTTGATGCTTCGGTTATTACTTTTGCAAGTTGGCAAATAGTGTGCAACATCACTAGGCCAACCACAAGGAACACTCGTTGCTGTGTCTCTTTCTCTGCCTATTACAATGAGTCTGTTGTACCATGCAACACGTGTGCTTGTGGTTGTGAAAACACAAAGCATTGTAATCCCAAAGCCAGAGCAATGCTTCTCCCTTCAGAAGCTCTTCTTGTACCTTTTGAAAACAGGACTAAGAAATCAGTTGCTTGGGCCAGATTAAAGCATTTTCGTGTCCCTAGTAAATTACCGTGTGGTGATAATTGTGGAGTTAGCATAAACTGGCATGTGGCTTCGGACTTCAAAGGTGGGTGGAGTGCCAGAATCACTCTGTTCAATTGGGAGCCTGACCCTTTTCAGAATTGGTTCACCGCACTGCAATTCAAGAAGGCTTCTCTTGGTTTTGAGAAAGTGTATTCCTTCAATGGGACATTACTTTCACGGCTCAACCACACTATTTTCATGCAAGGAGTACAAGGATCAAACTATTTGTTAGGTGAAGACAATGGAACAAACCCAAAGGTGCCTGGAAAACAGCAATCGGTTATTTCCTTTACAAAGAAAAACTCACCGGGTATCCAAATAGCAAACGGAGATGGCTTCCCTTCAAAG 1668 0.4484 MTSALTYYLLVALLFGFIHHLCEGQQPEALPPAAETCNGVFISYDFIGRRKEFPRLKNVTAQSWAFKATATVLNAGSEVVKSWKLFIGFQHKEILVSATGAVLIDGGDLPASVENGTTLAGASLPDLETSIDTAESSMWACCKKDPKFKSKLPKTKFLPRQKGDLTISYDVLQVYDNNYLVQVTMENHNPLGRLDRWNLTWEWMRGEFIYNMKGAFTREVEYSGCIHGAAGEYYRDMDFSKVLNCQKHPIISDLPPEKYNDTDIGKIPFCCRNGTLLPTLMDSTQSKSVFQMQVFKVPPDMNKSAIYPPEKWKIMGVLNPDYKCGAPLRVEPSRFPEPRGLDASVITFASWQIVCNITRPTTRNTRCCVSFSAYYNESVVPCNTCACGCENTKHCNPKARAMLLPSEALLVPFENRTKKSVAWARLKHFRVPSKLPCGDNCGVSINWHVASDFKGGWSARITLFNWEPDPFQNWFTALQFKKASLGFEKVYSFNGTLLSRLNHTIFMQGVQGSNYLLGEDNGTNPKVPGKQQSVISFTKKNSPGIQIANGDGFPSK 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi526g00001 556 PANTHER COBRA-LIKE PROTEIN 7 136 556 - -
Sebi526g00001 556 Pfam COBRA-like protein 179 358 IPR006918 GO:0010215|GO:0016020
Sebi526g00001 556 PIRSF COBRA 128 161 IPR006918 GO:0010215|GO:0016020
Sebi526g00001 556 PIRSF COBRA 159 556 IPR006918 GO:0010215|GO:0016020
Sebi526g00001 556 PIRSF COBRA 64 117 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi526g00001 Sebi-Chr526 6803 8700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi526g00001 31 556 COBRA Gene Family AT3G20580 55.709 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi526g00001 - - gmx:100799716 868.611