Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi525g00025 ATGGCCTCAAGCTCAGCTTGGACTACAAAGCAGAACAAAAGATTTGAGAATGCTTTGGCCATCTACGACAAGGACACCCCAGATCGGTGGCAGAAACTGGCCAGAGCCGTTGGAGGGAAGACAGTGGAGGAAGTAAAAAGGCATTATGAGATGCTTGTTGAAGATTGA 168 0.4762 MASSSAWTTKQNKRFENALAIYDKDTPDRWQKLARAVGGKTVEEVKRHYEMLVED 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi525g00025 55 ProSiteProfiles SANT domain profile. 2 55 IPR017884 -
Sebi525g00025 55 Gene3D - 5 52 - -
Sebi525g00025 55 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 55 IPR044636 GO:0003700
Sebi525g00025 55 FunFam Transcription factor SRM1 1 55 - -
Sebi525g00025 55 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Sebi525g00025 55 SMART sant 3 55 IPR001005 -
Sebi525g00025 55 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Sebi525g00025 55 CDD SANT 6 53 IPR001005 -
Sebi525g00025 55 SUPERFAMILY Homeodomain-like 5 54 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi525g00025 Sebi-Chr525 500010 500177 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi525g00025 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi525g00025 - - gmx:100804049 110.153