Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi524g00027 ATGGGAGTTGAACTGAAACACATAATTTGCATCTTGATATCAAAACAGATACGATACAGGCCTGATGCACCACTTGTACTCCGTGGGATCACATGCACATTTGAAGGAGGGCACAGAATCGGTATTGTTGGCCGGACAGGCAGTGGCAAGTCCACTCTCATTGGTGCTTTATTCCGTCTTGTGGAGCCAGCAGGTGGAAAAATCATAGTTGATGGCATTGACATTTGCTCCATTGGACTTCATGATTTGAGGTCACGGTTTGGTATTATACCTCAGGATCCTACTCTCTTTAATGGGACAGTCAGATACAATATGGATCCGTTATCTCAACACAGTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTCCAAGAGAAAGAAGGGGGCTTAGACTCCTCAGTTGTTGAAGATGGGGCAAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGGCGTGCTCTTCTAAGGAGAAGTCAGATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGTAATCACAGTAGCTCACAGGATACCAACTGTGATGGATTGCACTAAGGTCCTTGCCATTAGTGATGGAAAACTGGTAGAGTATGATGAGCCAATGAATTTGATGAAAAGAGAAGGGTCGTTGTTTGGGAAGCTTGTCAAAGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 771 0.4371 MGVELKHIICILISKQIRYRPDAPLVLRGITCTFEGGHRIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNMDPLSQHSDQEIWEVLGKCQLQEAVQEKEGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSQILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREGSLFGKLVKEYWSHFQSAESH 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi524g00027 256 CDD ABCC_MRP_domain2 16 228 - -
Sebi524g00027 256 Pfam ABC transporter 27 175 IPR003439 GO:0005524
Sebi524g00027 256 SMART AAA_5 36 228 IPR003593 GO:0016887
Sebi524g00027 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 237 IPR027417 -
Sebi524g00027 256 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 16 244 - -
Sebi524g00027 256 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 12 244 IPR003439 GO:0005524
Sebi524g00027 256 FunFam ABC transporter C family member 3 8 245 - -
Sebi524g00027 256 Gene3D - 13 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi524g00027 Sebi-Chr524 598920 600067 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi524g00027 2 256 Calmodulin-binding Proteins AT2G36910 29.278 2.34e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi524g00027 K05666 - lja:Lj5g3v1961200.1 478.404