Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi524g00018 ATGTCTTTCAATGTTCCAATATGCACCGGGAGGTTACCTAGGTTAGTCAGCAATATTATCAAGCCTTCTATAGAAGAAGATAAGCATGAGGATATCCAAGAGAACAATGGACATGTGAACCTAACCAAGTGCACTGGAGAGACAAATGCTAATTTGGCTAAAATAATTACCGATTATGTGGGGACACTAAATCAAAACAAATTGCGCCTTTTGGGCTACCCCACTAATCTGGATTTCGATTATGCTGCATTGAAACCATTGTTACAATTTCACATAAACAATGCTGGCGATCCATTTCTAGGGAGCAGCTACTCTCTGAATTCATCAGCATTCGAAGTGTGCGTACTTGATTGGTTTGCAAATTTGTGGGAGATAGAGAAGAGTGAGTATTGGGGATATGTCACAACTGGTGGAACTGAAGGCAATCTTCACGGCATTCTACTAGGGAGAGAACAATTTCCCGATGGGATCTTATATGCCTCAGAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAGTGCGTGAAGGTTGGCACTTTGGTGTCTGGTGAAATTGACTATGTTGAACTACATACTTCACTACTTGCTCACAAGGACAAGCCAGCCATCATCAATCTAAACATAGGAACAACTATGAAAGGAGCTATTGATGATGTTGATCTCACAATACAAACACTTGAGGAAAGTGGCTTCCCTCGCAATCGATTCTATATTCACTGCGATGGAGCTCTATTTGGAATGATGTTGCCGTTTCTTAAAAGAGCTCCAAGGACTACCTTCAAGAAGCCCATTGGAAGTATAGCCATTTCTGGCCATAAGTTCTTTGGATGCCCAATTCCTTGTGGTGTTGTAATAACTCGTTTACAACATATAAATGTTCTATCTAAAGATGTTGAATACATTGCTTCAAAGGATGTCACAATCACGGGTAGCCGCTGTGGGCATGCTCCAATGTTCCTCTGGTATGCTATCCAAGAGAGAGGTTTAATAGGATTTGAAAAGGAAGTGGAAATGTGCATAATGAATGCACGTCACTTACTGGATCAACTACGTCATGCTGGCATTGGTGCAATGTTGAATGGGTTTAGTAATACAATTGTTTTTGAAAGGCCCCTTGATGATGAATTTACGAGTAGGTGGAGTTTGGCTTGCAAAGGTAATATTGCACATGTGGTTGTAATGCAACATGTCACTATTGAAATGCTAGACTCATTTGTTATTGAACTAGTTCAACAACGACTCATTTGGTATCGAGATGGACTAAGAAAGCCTCCTTGCGTTGCAAATGATATTGGTGCAGAAAATTGTGCTTGTACTTTGCATAATTCTTCATTCTCATAG 1356 0.399 MSFNVPICTGRLPRLVSNIIKPSIEEDKHEDIQENNGHVNLTKCTGETNANLAKIITDYVGTLNQNKLRLLGYPTNLDFDYAALKPLLQFHINNAGDPFLGSSYSLNSSAFEVCVLDWFANLWEIEKSEYWGYVTTGGTEGNLHGILLGREQFPDGILYASEDSHYSIFKIARMYRMQCVKVGTLVSGEIDYVELHTSLLAHKDKPAIINLNIGTTMKGAIDDVDLTIQTLEESGFPRNRFYIHCDGALFGMMLPFLKRAPRTTFKKPIGSIAISGHKFFGCPIPCGVVITRLQHINVLSKDVEYIASKDVTITGSRCGHAPMFLWYAIQERGLIGFEKEVEMCIMNARHLLDQLRHAGIGAMLNGFSNTIVFERPLDDEFTSRWSLACKGNIAHVVVMQHVTIEMLDSFVIELVQQRLIWYRDGLRKPPCVANDIGAENCACTLHNSSFS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi524g00018 451 PANTHER - 41 447 - -
Sebi524g00018 451 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 271 292 IPR021115 GO:0016831
Sebi524g00018 451 Gene3D - 87 329 IPR015421 GO:0003824
Sebi524g00018 451 Pfam Pyridoxal-dependent decarboxylase conserved domain 110 358 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sebi524g00018 451 Gene3D Aspartate Aminotransferase, domain 1 330 418 IPR015422 GO:0003824
Sebi524g00018 451 SUPERFAMILY PLP-dependent transferases 69 415 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi524g00018 Sebi-Chr524 422671 425162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi524g00018 213 368 Calmodulin-binding Proteins AT3G17760 28.090 3.32e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi524g00018 K25193 - gmx:100784867 665.611