Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi524g00015 ATGGAGAAGAAAATGGCAATGACTTTCATTCCAGCAGCTCATGCCACGGAGCTTTTCAGTAATGCCGAGCTCTCTAGAGAAGAAGAGACACAGATAGACGTTGATGATGAAGCTGAGAATAATAAACATATCAACCTGCTTGCTATCACCGAGTGCACTGCTGGCGAGACACAAGACAATTTGGCTGCAGTAATTACTCACTACGTCCACACTCTAAATCAATACAACTCTCGCAACTTGGGCTACCCCGGTAATCAAGACTTCAACTATGAAGTATTAGCACCGTTGCTTCATTTTCACCTAAACAATGCTGGCGATCCATTTCTAGGGAGCGGCTTCTCTCTGAATTCAACAGCATTTGAAGTGTGCGTACTTGATTGGTTTGCAAATTTGTGGGAGATAGAGAAGAGTGAGTATTGGGGATATGTCACAACTGGTGGAACTGAAGGCAATCTTCACGGCATTCTACTAGGGAGAGAACAATTTCTAGATGGGATCTTATATGCCTCAGAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAGTGCGTGAAGGTTGGTACTTTAGTGTCCGGTGAAATCGATTGTATTAAACTACAGACTTCACTACTTGCTCACAAGGACAAGCCGGCCATCATCAATCTAAACATAGGGACGACTATGAAAGGAGGTGTTGATGACCTTGATCTTGTCATACAAACACTTGAGAAATGTGGTTTCACTCAAGACCAATTCTACATTCACTGTGATGGAGCTCTATTTGGAATCATGTTGCCTTTCCTCAAACAAGCACCGATGATCACCTTCAAGAAATCCATTGGAAGTATAACTGTATCTGGTCACAAGTTCTTGGGATGCCCAATTCCTTGTGGTATTGTGATAACTCGTTTAAAATACATCAATGTACTATCTAGAGATATTGAAATCATTGCTTCAAGAGATGCCACAATCACAGGCAGTCGTAGTGGGCATGCTCCAATATTCCTCTGGTATGCTCTAAAGAAAAGGGGATTAATAGGACTCAAGAACGAAGTACAAAAATGCATAATGAATGCGCGTTACTTGCATGATCGACTACGTGATGCCGGTGTTGGTACGATGTTAAATGAGTTTAGCAACATAGTTGTCTTTGAGAAGCCCTTGGATGATGACTTTACTCGTAGGTGGAATCTAGCATGCAAAGGAAATATTACACATGTGGTGGTGATGCAACACGTTAACATTGAAATGCTTGACTCCTTTGTTAGTGAATTTCTTCAAAAGCGATCCATATGGTTGAAAGATGGACGTTCTCAGTCCTTATCAGAGACGAATGCAGAGAGAGATGCCACGGATCCCTGCTTTAATTAA 1365 0.4132 MEKKMAMTFIPAAHATELFSNAELSREEETQIDVDDEAENNKHINLLAITECTAGETQDNLAAVITHYVHTLNQYNSRNLGYPGNQDFNYEVLAPLLHFHLNNAGDPFLGSGFSLNSTAFEVCVLDWFANLWEIEKSEYWGYVTTGGTEGNLHGILLGREQFLDGILYASEDSHYSIFKIARMYRMQCVKVGTLVSGEIDCIKLQTSLLAHKDKPAIINLNIGTTMKGGVDDLDLVIQTLEKCGFTQDQFYIHCDGALFGIMLPFLKQAPMITFKKSIGSITVSGHKFLGCPIPCGIVITRLKYINVLSRDIEIIASRDATITGSRSGHAPIFLWYALKKRGLIGLKNEVQKCIMNARYLHDRLRDAGVGTMLNEFSNIVVFEKPLDDDFTRRWNLACKGNITHVVVMQHVNIEMLDSFVSEFLQKRSIWLKDGRSQSLSETNAERDATDPCFN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi524g00015 454 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 280 301 IPR021115 GO:0016831
Sebi524g00015 454 Pfam Pyridoxal-dependent decarboxylase conserved domain 117 374 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sebi524g00015 454 Gene3D Aspartate Aminotransferase, domain 1 339 427 IPR015422 GO:0003824
Sebi524g00015 454 SUPERFAMILY PLP-dependent transferases 81 424 IPR015424 -
Sebi524g00015 454 PANTHER - 35 438 - -
Sebi524g00015 454 Gene3D - 102 338 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi524g00015 Sebi-Chr524 343998 348485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi524g00015 222 368 Calmodulin-binding Proteins AT3G17760 29.114 2.80e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi524g00015 K25193 - gmx:100781665 686.026