Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi523g00018 ATGGCCTTGTCAAGCCCACACCTACAAAGATTCCTGTTAAGCAAGCTTCATCATGGCCGCTCCTCAACTCCTCACAGAAACAGCACCTTCACCATTACCACCAGAACCCGCCGCTGCTGCTCTGCCATAGCCATTGATGCTCCTTCATCATCTTTGACTGACTCTCCTGCTATTCGATGGGGATCCATAGCTTTGCAGGGTTCCCGTGAAGAGATGGAAGATGATATTATTGTCCGATCCGATGGCCTTGGCGGTTTCTCTTTTGCAGCTGTCTTTGATGGCCATGGAGGGTTTTCTTCCGTCAAGTTCCTCAGTGCAAACTACAGGGATGAACTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGGTTACTATTAGTTGGGAATGATTTCAAGGTCATTAGAGAAGCATTGCAAGAGGCATTTCTCAAGGCTGACTCGAGATTGTTAAAATGGCTTGAAATGAATGGGGAGGAGGAGGATGAATCAGGTGCTACGGCAACTACGGTGTTCATAGGAGATGATAACTTGCTAATTTCACATCTTGGTGACTCATCTGCGGTTCTATGCAGATCTGGAAAAGCAGAAGTGCTGACTATCCCTCACCGGCCATATGGGAACAACAAGACTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGCTTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAGATGCTGCGAAAAGGGGTTCAGGAAGGAAGATGGTCAGAAAAGTTTATTTCTCGTGTACAGCTCAACAATGACTTGGTTGTTGCATTACCTGATGTTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCAGATGGCTTATGGGATTACATGAGCAGCTCAGATGCAGTTTCTTTTGTGAGGGATCAGCTACGAAAACACGGAAACATACAGCAAGCTTGTGAAGCGCTTGCAGAAGCCGCTTTGGATCGGCGCACACAGGATAATGTCAGCATTATAATTGCCGATTTAGGGCGGACAGACTGGCAGAATTTGCCACTGCAGCAACAAAATGTGATATTTGAGCTAGTCCAAGCCCTTGCCACCATTGTAATTGTATCAATTGGGATCTGGTTTTCATCACAGCTTTCTTTATAG 1182 0.4509 MALSSPHLQRFLLSKLHHGRSSTPHRNSTFTITTRTRRCCSAIAIDAPSSSLTDSPAIRWGSIALQGSREEMEDDIIVRSDGLGGFSFAAVFDGHGGFSSVKFLSANYRDELYKECVEALQGGLLLVGNDFKVIREALQEAFLKADSRLLKWLEMNGEEEDESGATATTVFIGDDNLLISHLGDSSAVLCRSGKAEVLTIPHRPYGNNKTSLQEIKRIREAGGWLVNGRICGDIAVSRAFGDMRFKTKKNEMLRKGVQEGRWSEKFISRVQLNNDLVVALPDVYQVALGSDAEFVVLASDGLWDYMSSSDAVSFVRDQLRKHGNIQQACEALAEAALDRRTQDNVSIIIADLGRTDWQNLPLQQQNVIFELVQALATIVIVSIGIWFSSQLSL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi523g00018 393 Gene3D - 58 358 IPR036457 -
Sebi523g00018 393 SUPERFAMILY PP2C-like 55 353 IPR036457 -
Sebi523g00018 393 PANTHER PROTEIN PHOSPHATASE 2C 51 350 IPR015655 GO:0004722|GO:0006470
Sebi523g00018 393 Pfam Protein phosphatase 2C 61 345 IPR001932 -
Sebi523g00018 393 ProSiteProfiles PPM-type phosphatase domain profile. 59 352 IPR001932 -
Sebi523g00018 393 CDD PP2Cc 58 352 IPR001932 -
Sebi523g00018 393 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Sebi523g00018 393 SMART PP2C_4 49 350 IPR001932 -
Sebi523g00018 393 FunFam Protein phosphatase 2C 57 58 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi523g00018 Sebi-Chr523 247493 251085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi523g00018 1 329 PP2C-type Phosphatase Gene Family AT4G27800 62.727 3.41e-149 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi523g00018 K04457 - gmx:100784071 620.928