Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi523g00014 ATGTCTGGAAGTATGAGCAATGCAGACACAGGGGGATTGAATCAATTTGAGAATAGTAGCTGTCCTTATTATTTGGAGGATGATGACAGAGGTGTATGTGTAGTAGATGAGAATTGGGGAAATAATAGTGATGTTTATGGTGATGAAGATAGTTGTGGAAGTCCTTCGTCGGAGAATAATGATTGTTTGGGAGGTGCTTTCTTTTGTGGTGATGAGAATGGGGGTGCTTTCTTGATGGGAGAAGATTGGGAAGATAATAATGATAACGGTCAGGATGATAAGTGTGGTAATGATAAAATTGTAATTGAAACAAATGATGATGTTATTAACATGGGAGATTTGGCTTTGTTCAGTCCACATGAGATTGAGAGTTATGAATTTGGTAGTATTGAGGTAGCGTACAAGTTTTATCATGAATATGGGTTTGCTAATGGTTTTGGAATAAGAAGGGGGAGAACTTTAAAGAGCAAAAAAACATTGGAGGCATATCAAAAAGAGTTTATGTGTTGTAGAGCTGGAAAGCGTGAAGATCGTGGTCAAAAAAAGGAAGAGAGGGTTCGTGAGCAGAAGGCAGAAACTAGGTGTGAATGTAAGGCGAGATTTCATATTCATGTGAATGAGTTATCTGGTAGGTGGTATTGTGTTTGCTTTGAAGATGAACACAACCATGGTCGGTTAGGTGAAGTGCATTGTAGTATGTTACCAAGTTATAGAAGAATGTCTGACAATGACATTATACAAATGAATAACATGATGAAGGTTGGGATTAGGCCACCTAATATATTCAACACATTTGCTAGTCAGTCGGGTGGTTATGAGAAGATAGGTTTAAGAAAGAAAGACATGTATAACAAGATAGGTGAGCAGAGGCGAAATTTATGTTCTGATGCTAAAGGAGCCATTGAATACCTTGGTTTGCTTGGTCTGAATGATCGTATGATGTATTATGAGCACACTGTTGATGAACATGGTAGGTTGCAACATTTTTTTGGAGTGATGGATATAGCCAAGTGGATTACAACATTTTTGGGGAAGTGTTAG 1041 0.3794 MSGSMSNADTGGLNQFENSSCPYYLEDDDRGVCVVDENWGNNSDVYGDEDSCGSPSSENNDCLGGAFFCGDENGGAFLMGEDWEDNNDNGQDDKCGNDKIVIETNDDVINMGDLALFSPHEIESYEFGSIEVAYKFYHEYGFANGFGIRRGRTLKSKKTLEAYQKEFMCCRAGKREDRGQKKEERVREQKAETRCECKARFHIHVNELSGRWYCVCFEDEHNHGRLGEVHCSMLPSYRRMSDNDIIQMNNMMKVGIRPPNIFNTFASQSGGYEKIGLRKKDMYNKIGEQRRNLCSDAKGAIEYLGLLGLNDRMMYYEHTVDEHGRLQHFFGVMDIAKWITTFLGKC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi523g00014 346 Pfam FAR1 DNA-binding domain 135 223 IPR004330 -
Sebi523g00014 346 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 48 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi523g00014 Sebi-Chr523 233886 235092 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi523g00014 FAR1 2.1e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi523g00014 - - mtr:112418552 223.787