LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi523g00008	ATGGAGATGTCTAAGAAATCTCTCGCTGCAACTTTTTTTGTTTTGTTTCTGGTCTTCTGTGATGTCTCTCTGGCGAGGATGGTGAAGAAAACAGAGCACCGAAAGTATGGTTATATAGTTCATGTGTCCAAATCCCAAATGCCATCAAGCTTTAACCATCACTCAGTATGGTATGAATCGATTTTGAAATCGATCTCTAACTCAACAGAAATTCTCTACACCTACAACAATGCAATTCATGGATTCTTTACAAGGCTAACAGCTGAAGAAGCTAGATTGCTAAAGAGCCAGATCGGAGTTCTAATGGTGTTTCCAGATAAACAATACAAGCTCCACACAACAAGAACCCCACACTTCCTTGGCCTCGACAAAATCCAGGGCACATTCCTCGAGACAAATGGCAAAGATGGTAGTGACGTAATTGTTGGACTCCTCGATACTGGTGTTTGGCCTGAAAGCAAGAGCTTCGACGATACTGGATTTGGACCCATCCCTAGCACCTGGAAAGGAAAATGTGAAACAGGTACCAATTTCTCAACCTCGAACTGTAATAAGAAATTGATTGGAGCCAGGGGTTCTATATCGCCTCGAGATGATGATGGTCATGGCACCCATATTGCAAGCACAGCTACAGGGTCTCTGGTGCAAAACGCAAGCCTTTTTGGATATGCTAATGGAACAGCACGTGGGATAGCCCCAAGCGCTAGAGTCGCTATGTATAAGGTTTGTTGGAATGAATCTTGTGTTGTTTCTGATATATTAGCTGCAATTGACCAGGCCATCATTGATAATGTAAATATCCTTTCCATTTCGCTCGGTGGTCCACAATTTGAGTACTATGAGGACCCTGTCGCAATCGGAGCTTTTTCGGCTATGGAGCATGGGATTCTAGTCTCTTGCTCTGCAGGAAACGCTGGTCCTGAACCCGCCAGTGCAACCAATATAGCACCTTGGATGATCACCGTGGGAGCTGGCACACTTGATCGAGATTTTCCTGCATACGTTAGAATCGGAAATGGACAAAATTATTCTGGAGTGTCTCTTTATAATGGAAATCCTTTGCCTGGTCATCCATTGTCGTTCATATACGCAGGGAATGTAAGCAAAGACAAGTCCCCAAAGTTTAGTTCTGAATATTGCTTGAAGGATAGCTTGGCGGCAAAAAAAGTTAAGGGAAAGATTGTATTGTGTGACCGTGGACAAAGTAGTAGGGTAGAGAAAGGAAATACGGTGAAATCTGTTGGTGGTTTGGGCATGGTTTTAGCTAATATGGACCTCGAAGGAGAGGAACTAGTGGCAGATACCCATATTTTGCCTGCAACTTTAGTGGGCTCAAAAGAAGGTAATGCCATCAAGCAATACTTGTTTTCTAATCCAAAATCGACGGGTACAATTGTATTTCAGGGAACAAAGCTTGGAATTGAGCCATCACCGATTGTTGCATCATTCAGCTCTCGAGGCCCTAATTCTATCACCCCAAAGATATTAAAGCCCGATTTGATCGCACCAGGTGTTAACATCTTAGCAGCATATTCAAGAAATGCGAGCACCACTGATTTGGATTCAGATGATAGACGTGTGGACTTCAACATCATCTCGGGCACGTCCATGTCATGCCCTCATGTGAGTGGGCTAGCAGCTCTAATCAAGTCGGCTCATCCAGGTTGGAGCCCAGCTATGATTCGATCTGCACTGATGACCACGAGCTATACAACTTACAAGAATGGTCAACCATTGTTGGACAGTGCCAACAAAAAACCAGCAACACCGTTTGATTATGGTGCTGGACACGTGGACCCTGTTCCTGCACTTAATCCTGGACTGGTTTATGATTTGACAGTGGATAATTATCTAAGCTTCCTCTGTGCATTAAACTACACATATGATAATATTGAAGCTGTGACGAGGAGAAAGTATAAGTGTGATCCAAACAAACGATATAGTGTAACCGACCTTAATTACCCTTCATTTGTTGTGGTGTTTAAAAAGCCAGCAGGTAGGAATGGTCCAACAAATGTTAAACACATGCGAACTCTTACCAATATGGGGTTTGCAGGAACTTACAAGGTATCGGTTAAGTTGGATATCCCAAATGTTAAGGTCTCGGTTGAGTCGAGAGTGTTGAGTTTCAAGGGGGGGAAATGA	2145	0.434	MEMSKKSLAATFFVLFLVFCDVSLARMVKKTEHRKYGYIVHVSKSQMPSSFNHHSVWYESILKSISNSTEILYTYNNAIHGFFTRLTAEEARLLKSQIGVLMVFPDKQYKLHTTRTPHFLGLDKIQGTFLETNGKDGSDVIVGLLDTGVWPESKSFDDTGFGPIPSTWKGKCETGTNFSTSNCNKKLIGARGSISPRDDDGHGTHIASTATGSLVQNASLFGYANGTARGIAPSARVAMYKVCWNESCVVSDILAAIDQAIIDNVNILSISLGGPQFEYYEDPVAIGAFSAMEHGILVSCSAGNAGPEPASATNIAPWMITVGAGTLDRDFPAYVRIGNGQNYSGVSLYNGNPLPGHPLSFIYAGNVSKDKSPKFSSEYCLKDSLAAKKVKGKIVLCDRGQSSRVEKGNTVKSVGGLGMVLANMDLEGEELVADTHILPATLVGSKEGNAIKQYLFSNPKSTGTIVFQGTKLGIEPSPIVASFSSRGPNSITPKILKPDLIAPGVNILAAYSRNASTTDLDSDDRRVDFNIISGTSMSCPHVSGLAALIKSAHPGWSPAMIRSALMTTSYTTYKNGQPLLDSANKKPATPFDYGAGHVDPVPALNPGLVYDLTVDNYLSFLCALNYTYDNIEAVTRRKYKCDPNKRYSVTDLNYPSFVVVFKKPAGRNGPTNVKHMRTLTNMGFAGTYKVSVKLDIPNVKVSVESRVLSFKGGK	714

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi523g00008	714	PRINTS	Subtilisin serine protease family (S8) signature	533	549	IPR015500	-
	Sebi523g00008	714	PRINTS	Subtilisin serine protease family (S8) signature	198	211	IPR015500	-
	Sebi523g00008	714	PRINTS	Subtilisin serine protease family (S8) signature	137	156	IPR015500	-
	Sebi523g00008	714	FunFam	Subtilisin-like protease SBT1.9	26	112	-	-
	Sebi523g00008	714	CDD	PA_subtilisin_like	334	465	-	-
	Sebi523g00008	714	Pfam	Subtilase family	137	596	IPR000209	GO:0006508\|GO:0008236
	Sebi523g00008	714	Gene3D	-	621	714	-	-
	Sebi523g00008	714	ProSiteProfiles	Serine proteases, subtilase domain profile.	108	604	-	-
	Sebi523g00008	714	Pfam	PA domain	380	451	IPR003137	-
	Sebi523g00008	714	Gene3D	Peptidase S8/S53 domain	139	617	IPR036852	GO:0004252\|GO:0006508

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi523g00008	Sebi-Chr523	157196	159412	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi523g00008	1	711	Subtilisin-like Serine Gene Family	AT5G67360	61.126	0.0	880

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi523g00008	-		-	gmx:100801866	948.347

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