Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi522g00042 ATGGCAGCCAAGCTGTTGCATTCTTTAGCAGATGATAACCCAGATTTACAGAAGCAAATAGGATGTATGACTGGGATTTTCCAACTCTTTGATCGTCACCATATTATCACTGCTCGCCGCATTAGCCAGAAAAGGCTTCCTCCTGGTAATTCCCACTTCAATTATGACAGCCTGCAAAGAGATTCTAATAGAATACACCAACGAAAAACAGCAGTTGATATGAACTTAAACAAGGGTGTGAGTGAAAAACAAAGAATTTCAACAGAATCATCTAGAGCCTCATTCTCTTCTTCTTGTTCATCATCAATGTCCTCTCTGGAGTGTAAAGCTCAAGCAGATGCTCCTGACAGGATCATTTTTCCTGAAATTCCTATGAGAGACCCAGTTATGAACCTAAAAAGTACCTCTCCCCATTTGGGAAGTCACTCCCTTGACCTGAGGGATGTTGTGAAGGACTCCATGTATAGAGAGGCCAGAGGACTATCCAAAGAGAAAGCTTCCATTCGTGCTATGAAGCACAAGGATTCCCCAAGACCTCTTCATCTATCCAAATCTCTCAATGGAAAACAAAGTGTGCCTGTTGATCTAAAGGAGTCTATTCAAGTCCTTACTAAACTTAGAGAAGCACCTTGGCATTATGGTGAAGCAAAAGAACTTCCAAGATTATCATATGAAGTAAAAGATGGTCAATGGCATTCAATCTCAAAGGATGCTCCTCGGTATTCTTATGATGGAAGAGGAACAAGAAGTTTGTCTTTTGAATCACCTGACACCACCAAATGTGCACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTTGACAGTAGAGAAAGCTCATGGCGCACATACAGCTATGATTCAAAAGCTAGTCACCTCTCAAGAAATTTCAGTACTGGTGGAGCCTCAACCTCAGATGACAAAATCTCTAGTCTACAACAATTTTCAGCAAGCCAGAGCCGGCCACCTAGTGTTGTAGCAAAATTAATGGGCTTGGAAGCATTGCCAGAATCCTATTTGGTCAGTGATACTCAGTCAGGTTTGAGTGAAACTGGCTCAATTCAAGGTAATGGTCAGTTTTCAAAAGATGGATTCACAAGGCCACTTAGAGTTTCTAATTCCCTAAAAGGCTCATTGAAAGTTACCACTTCCCCAAGGAGGAAGAATCCTGATTTGGTTGTGAAACCTGTCTCAAGTTCAAGGTTTCCTATTGAACCAGCACCATGGAAGCAGAAGGATGGAATTCAAAGCTCTAAGAAACAAAGTTCCAGGGCCATAAAGGCTCCAGCTAGAACACTGGATTCATTTCCTTCAGTTTATAGTGAGATTGAGATGAGATTGAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTAAAACGGATATTGGAAGCAATGCAAGTAAAGGGGCTGTTAGAGACCAAGAAAGAGGAACAAGCTTCCAATGATGTTGGAAATCAAAGATTCTATGAATCAAAATTGAGTCTAATTCAGGATTCTATGTCAGTGAGGCAACAAACAATCAGAGGGTCTGACTCAGCAAGGACTTTTGAATCTCCAATTGTGATAATGAAACCAGCAAAACTTGTAGACAAAACTGGAGTTTCTGCTACTTCAGTCATTCCAATTGGTGGACTTTCTGATTCCAATAAACTCCACAGTGGTGGTGTACATGCACATATGAAAAAAGGGACAGCTTCTGGTCAAATAGCAAAAGATCAGTCTCCTAGAAACAGTCGCAGGGATGCTTCTACCAGTTCTAGTGATAAGAAAGCAAGTAGTAGTAAGACTATAAAATCAGCACAATCTCAACCAAGGTCTCAACAATTTGCAAAAGAAAATAGCTCAAGTTCAGTGAAGATTTCAGGATCTGTGAGCCCAAGAATGCAACAGAAGAAATTAGAGTTGGAGAGGAGATCTCGCCCACCTACCCCACCATCAGATTCAAATAAAGGCAGAAAGCAATCCAGTAAACATACAACAGAATCAGATTCTCCTGGGAGGAAACTGAGACGTAGAGTCCCTCATTCACAGCATAGTGATGACCAACTTAGTGAGATAAGCAATGAGTCAAGAAGTGTAAGTTGCCAAGAGGATGAAATATCTATGCAATCAGATAGTATAACTGTGGACTCAAAGATGGATATGGAAGTCACCAGCAGTTTACAATCTGCTGAAATTATTGATGGCCAAAGCCCATCTATGGAGGATATTGAGCAGTTGGTTTCAGGATCAATGAAGAAGAATTCAACTCTGAGGATGGATGAGGATGATTCATCTGCAGAACTTGCAATAGATGCCCCAGATCATCCAAGCCCTGTTTCAGTTCTTGATGTCTCAGAATACAAAGATGACGTGCCATCCCCTGTGAAGCTTATATCCAATGCTCACAAAG 2401 0.4111 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHIITARRISQKRLPPGNSHFNYDSLQRDSNRIHQRKTAVDMNLNKGVSEKQRISTESSRASFSSSCSSSMSSLECKAQADAPDRIIFPEIPMRDPVMNLKSTSPHLGSHSLDLRDVVKDSMYREARGLSKEKASIRAMKHKDSPRPLHLSKSLNGKQSVPVDLKESIQVLTKLREAPWHYGEAKELPRLSYEVKDGQWHSISKDAPRYSYDGRGTRSLSFESPDTTKCAPKLKELPRLSLDSRESSWRTYSYDSKASHLSRNFSTGGASTSDDKISSLQQFSASQSRPPSVVAKLMGLEALPESYLVSDTQSGLSETGSIQGNGQFSKDGFTRPLRVSNSLKGSLKVTTSPRRKNPDLVVKPVSSSRFPIEPAPWKQKDGIQSSKKQSSRAIKAPARTLDSFPSVYSEIEMRLKDLEFKQSGRDLRALKRILEAMQVKGLLETKKEEQASNDVGNQRFYESKLSLIQDSMSVRQQTIRGSDSARTFESPIVIMKPAKLVDKTGVSATSVIPIGGLSDSNKLHSGGVHAHMKKGTASGQIAKDQSPRNSRRDASTSSSDKKASSSKTIKSAQSQPRSQQFAKENSSSSVKISGSVSPRMQQKKLELERRSRPPTPPSDSNKGRKQSSKHTTESDSPGRKLRRRVPHSQHSDDQLSEISNESRSVSCQEDEISMQSDSITVDSKMDMEVTSSLQSAEIIDGQSPSMEDIEQLVSGSMKKNSTLRMDEDDSSAELAIDAPDHPSPVSVLDVSEYKDDVPSPVKLISNAHK 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi522g00042 800 MobiDBLite consensus disorder prediction 689 751 - -
Sebi522g00042 800 MobiDBLite consensus disorder prediction 160 180 - -
Sebi522g00042 800 MobiDBLite consensus disorder prediction 345 425 - -
Sebi522g00042 800 MobiDBLite consensus disorder prediction 590 631 - -
Sebi522g00042 800 MobiDBLite consensus disorder prediction 160 186 - -
Sebi522g00042 800 MobiDBLite consensus disorder prediction 654 688 - -
Sebi522g00042 800 MobiDBLite consensus disorder prediction 752 766 - -
Sebi522g00042 800 PANTHER LONGIFOLIA PROTEIN 1 798 IPR033334 GO:0051513
Sebi522g00042 800 MobiDBLite consensus disorder prediction 345 384 - -
Sebi522g00042 800 Pfam DUF761-associated sequence motif 316 338 IPR032795 -
Sebi522g00042 800 MobiDBLite consensus disorder prediction 545 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi522g00042 Sebi-Chr522 674020 677308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi522g00042 138 799 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.095 4.78e-127 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi522g00042 - - gmx:100809978 999.964