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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Sebi522g00033
ATGGGGAGGGGAAGAGTGCAGTTAAAGAGGATTGAGAACAAGATCAATAGACAGGTGACGTTCTCCAAGAGAAGGTCTGGTTTGCTCAAGAAAGCCAATGAGATCTCTGTGCTTTGCGATGCTGAAGTCGCTCTCATTGTCTTCTCTACTAAAGGCAAGCTTTTCCAGTACTCCAGCGACCCTTGTATGGAAAGAATTCTTGAACGGTATGAGAGATATTCGTATGCGGAGAGGCAGCTTGTGACAAATGATCAGGCACCAAATGAAAATTGGGTTCTAGAACACGCAAAGCTCAAGGCTAGGATGGAAGTCCTACAGAGAAATCAAAGGAATTTTATGGGAGAAGAACTGGATAGCTTAACTCTGAAACAGCTTCAGAATTTGGAACAACAACTTGATTCTGCCCTCAAACACATTAGATCAAGGAAGAACCAAGTCTTACATGAATCTATTTCAGAGCTTCAGAAAAAGGATAAGGCACTCCAAGAACATAACAACTTGCTCGCCAAAAAGATAAAGGAAAAAGAGAAGGCGGTGGCCCAAGAGGAGCAAAGGGGGCTGCAAAACAGTGTGGATATGACCACCTCTGTCCTTGTAACTCAACCATTGGAGTCCTTGAATACTGGAGGCTCCTCACAAGCCAGATGTGATGAAGGATCTCCAAACCAAACTCGAGCTAATACCATTCTTCCCTCTTGGATGCTTCGTCCTACAAATGAATAG
723
0.4385
MGRGRVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIVFSTKGKLFQYSSDPCMERILERYERYSYAERQLVTNDQAPNENWVLEHAKLKARMEVLQRNQRNFMGEELDSLTLKQLQNLEQQLDSALKHIRSRKNQVLHESISELQKKDKALQEHNNLLAKKIKEKEKAVAQEEQRGLQNSVDMTTSVLVTQPLESLNTGGSSQARCDEGSPNQTRANTILPSWMLRPTNE
240
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Sebi522g00033
240
Gene3D
-
13
86
IPR036879
GO:0003677|GO:0046983
Sebi522g00033
240
MobiDBLite
consensus disorder prediction
205
228
-
-
Sebi522g00033
240
Coils
Coil
122
145
-
-
Sebi522g00033
240
PRINTS
MADS domain signature
38
59
IPR002100
GO:0003677|GO:0046983
Sebi522g00033
240
PRINTS
MADS domain signature
23
38
IPR002100
GO:0003677|GO:0046983
Sebi522g00033
240
PRINTS
MADS domain signature
3
23
IPR002100
GO:0003677|GO:0046983
Sebi522g00033
240
CDD
MADS_MEF2_like
2
79
IPR033896
GO:0000977|GO:0045944
Sebi522g00033
240
ProSitePatterns
MADS-box domain signature.
3
57
IPR002100
GO:0003677|GO:0046983
Sebi522g00033
240
Coils
Coil
88
108
-
-
Sebi522g00033
240
Coils
Coil
154
185
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Sebi522g00033
Sebi-Chr522
388276
393144
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Sebi522g00033
1
213
MADS-box Gene Family
AT1G26310
59.565
6.91e-89
261
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Sebi522g00033
K-box
2.8e-28
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Sebi522g00033
K09264
-
gmx:100816836
351.673
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