Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi522g00027 ATGCAGGAAGGTGAACATAATGACAATGAGCGGAGAGAAAGCCATGAGAATTGTGAGGGAATGGGTAATTTATCTGAACATAAGGAAGATGAGAATGATGGAAATAAAAATGAGGGAAGCGAAAATGAATTGAGTGAACGCATTTGTATTGATAACTTCCAGGACATTGTTAAAAACAATCTTGTATCTAAAAGTCCTGAGCAGATTATGTTGAATTGGTATGGGAGGTTTAACGGGTTTGCTGTCCGAAAAAGCAAGATAAGTTACAATTGTCGGAAGGAAGTTGTTGGTCGTGACTTTTTGTGCAACAAAGAGGGCAAACGGAGAAAACGAAATGATGATAGTGATTCAGAAGAAGAGCTCGAACGAGAGCCTAAACCGCTTACTAGGTGTGAGTGTAAAGCTAAATTTCGTGTGCATGTGGACTTTAATTCACATCGGTGGTATGTGACGTGTTTTGACAATAGACATAATCATGAGCTGCTGGATGAAAAGTTTTTGGGTATGCTGCCAGCTCATAGAAATATGAGTGAAGGGGATATTATAGAGATGAATAATATGTTAAAGGCTGGTATAGGGGCTCCACAAATTTACAATTCATTTGCAAGCCAAGCAGGAGGGACCACGTCACGGTGCGAGGGTCTACATTCTGAAGTTGGGAAGTTCATTAATTCACGATTGAGTTTGTGTGAGTTCTTGCAACATTACTATTGTTGTTTGACTCACATGCGTTACAAGGAAGTGCAAGATGACTTCAAATCAGTGCATGGTGAGCCTGTTGTGCGTACTAGTTTTGCTTCACTTGAGAAGTCTGCTAGTAAAGTTTATACCAGGGAAGTGTTTCGTCTTTTTCGTTCTGTGTTGGAGAGGGCAGCCCATGTGAAAGTTGTTCGGTGGAAAGAAAAGTTCCCATGCTTCATTTACACTGTTTCGAAGTATAGAAAAGTAGGGAGGGAGTGGAACGTGACATTCTACCCTGCTGAAAGTGTTTACAAATGTTCTTGTATGAGAATGGAATCAATTGGGCTTCCATGTGACCATATAATTGGGGTTTTGGTTTACCAAGATATTTCAGAATTACCTAGACCCTTAGTACTTGATAGATGGTCAAAGGATGCAAAGCTGGGACTTCGTGGTATGAACGGTAATGGATTTAATTTCTGTGACCCTCAATTGACAGCTAGATATTGGGCTTTGATGCACAGGTTTAGGGATGTGGCACGTGAAGCTTATGAAAATTTGGAAGATTACCATGATGCAGATGAGAATGCCATTAGTTTCCTTGCCCAGCTGAAAGAAAAAAAGGCAAGGAGGAGTGGTGGAGATGCATCTGTCGTGGTTAATGAAAATAACAATGTGGGGGATCCTTTACGGGCTAGAACAAAAGGAGCAGGTGGTGGAAGGTCAACACAAGCAGGGACGAGAAGGAGGCGTCCCCATCATTGTCGTAAATGCAAAGTTGCAGGGCACAATATTAAGACTTGCCCTTTACTGCGACCATCAAGTTCCCAACCAGTACGTGCAACAAGAGGTGCTTCCATAGATGGTGATAATGCAGAAGAAGTCATAGGGGATGCGGAAAATAACATGGACACAAGTGACATGTATTGGTCACCTATAGGTGACAACTACTGA 1635 0.4171 MQEGEHNDNERRESHENCEGMGNLSEHKEDENDGNKNEGSENELSERICIDNFQDIVKNNLVSKSPEQIMLNWYGRFNGFAVRKSKISYNCRKEVVGRDFLCNKEGKRRKRNDDSDSEEELEREPKPLTRCECKAKFRVHVDFNSHRWYVTCFDNRHNHELLDEKFLGMLPAHRNMSEGDIIEMNNMLKAGIGAPQIYNSFASQAGGTTSRCEGLHSEVGKFINSRLSLCEFLQHYYCCLTHMRYKEVQDDFKSVHGEPVVRTSFASLEKSASKVYTREVFRLFRSVLERAAHVKVVRWKEKFPCFIYTVSKYRKVGREWNVTFYPAESVYKCSCMRMESIGLPCDHIIGVLVYQDISELPRPLVLDRWSKDAKLGLRGMNGNGFNFCDPQLTARYWALMHRFRDVAREAYENLEDYHDADENAISFLAQLKEKKARRSGGDASVVVNENNNVGDPLRARTKGAGGGRSTQAGTRRRRPHHCRKCKVAGHNIKTCPLLRPSSSQPVRATRGASIDGDNAEEVIGDAENNMDTSDMYWSPIGDNY 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi522g00027 544 MobiDBLite consensus disorder prediction 445 482 - -
Sebi522g00027 544 ProSiteProfiles Zinc finger SWIM-type profile. 308 356 IPR007527 GO:0008270
Sebi522g00027 544 MobiDBLite consensus disorder prediction 1 42 - -
Sebi522g00027 544 Pfam FAR1 DNA-binding domain 73 162 IPR004330 -
Sebi522g00027 544 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 208 422 IPR031052 GO:0006355
Sebi522g00027 544 SMART 26again6 331 358 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi522g00027 Sebi-Chr522 360388 362862 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi522g00027 FAR1 3.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi522g00027 - - tpra:123913749 257.684