Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi522g00002 ATGGCACAAGATACTGTTTCTGGCATTGAATCGCCTCGGCGACGAAATGGTCTATTGCGAGATCAGGTCCAACTAGTTAAAAGAAAGGATTCTGATCGCTATGAAATTGTTCCAATCCAGGACACTTTGTCATTTGAGAAAGGATTCTTCATAGTTATCCGTGCATGCCAGTTGTTGGCTCAAAAGAATGATGGAATCATATTCGTAGGAGTTGCAGGTCCCTCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGGTCCTCAACTTTATGCCAAGCGTCGCTGTCATAACAATGGACAATTATAATGATTCTAGTCGAATCATAGATGGCAACTTTGATGACCCCCGGTTGACGGATTATGATACCTTGCTTGAAAATATACAGGGTCTTAAAGAAGGGAAGCCTGTTCAGGTTCCAATATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTGTTGAAGTTCCTAGCTCCCGTATCGTTATCATTGAAGGCATCTATGCCGTGAGTGAAAAATTAAGGCCTTTGCTTGATCTCCGTGTTTCTGTCACCGGTGGAGTTCATTTTGACCTTGTCAAGCGTGTTTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAGATTTCTGAAACGGTATATCCCATGTATAAAGCTTTTATAGAGCCAGATCTCCAAACAGCACATATAAAAATTATTAACAAGTTCAATCCATTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCAGCAAGAGCTGTGACAGCAGATCAAATCAAGGCAGTTATTGCTGCAGAGCATACTGAATCCAAAGAGGAAACATATGACATATATCTTCTACCCCCTGGGGAAGACCCTGAAGCATGTCAATCATATTTGAGGATGAGAAACCGGGATGGAAAATACAATCTCATGTTTGAGGAATGGGTTACAGATAGTCCATTCATAATATCACCTAGAATTACTTTTGAGGTCAGTGTGCGCCTACTCGGAGGGCTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAGCAGCCATGTCTTTCATGATGATAAAGTGTCCATAAAAACTGATTGGCTAGAACAACTTAACCGCTTATACATTCAGGTGCAAGGGAAAGATAGAAACTATGTTAAATTTGTAGCAGAGAAACTGGGGTTGGATGGTTCCTATGTTCCTCGCACGTACATTGAACAAATCCAGCTAGAAAAGCTCGTAAATGATGTAATGGCACTGCCAGATGATCTAAAGACAAAACTCAGCATAGATGATGATATGGTTTCAAGTCCCAAAGAAGCCCTTTCCAGAGCTTCTGCTGATAGGAGAATGAAATATCTTAATCGTGGTATTTCACACTCATATTCAAATCAAAGGGACAAGATTCTTCCTAAGTTGACTAAACTTGCTATAAATAACAGAAGATTTGATGGGAGAGCTCTAGAATCACCTGCACCGATTGCTAACCAAGGAGTCATCACTCAACTTTCTGATCAAATTTCCACATTAAATGAAAGGATGGATGAATTCACCTCTCGTATCGAAGAGCTGAATTCGAAGTTTGCTATCAAAAAAGTTTCAGCCAGTCAACCAAACTTGGCTTTACAGGCCGAGGCCTGCAATGGCTCCGGCCCTACTTCTCTCTTTGTAACTGGATTAGGCAATGGTTCATTGACTGGATCATTGCTACCTAATTCTTCATCATCGTCTCAACTGGCTAAAGAGTCTCCCATGATGGAAGAGGTATTACTTGTTGCACGAGGACAGCGTCAAATTATGCATCAACTAGACACACTGAGCAATCTTATGCATGAATACTTGGGAGAAAGGTCACGGCAGGGAAGAACAGACCAGACAGGCAGAATGAGTGAAGTTGAATCCGTTGCCATCCCTCTGGTTCTGACATTGGCCATTGGTGCTGTTGGTGTGTTCTTGTTCAAGGGTTTGACATCTCAAAAATAA 1986 0.4179 MAQDTVSGIESPRRRNGLLRDQVQLVKRKDSDRYEIVPIQDTLSFEKGFFIVIRACQLLAQKNDGIIFVGVAGPSGAGKTVFTEKVLNFMPSVAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIQGLKEGKPVQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYAVSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSARAVTADQIKAVIAAEHTESKEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVSIKTDWLEQLNRLYIQVQGKDRNYVKFVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKTKLSIDDDMVSSPKEALSRASADRRMKYLNRGISHSYSNQRDKILPKLTKLAINNRRFDGRALESPAPIANQGVITQLSDQISTLNERMDEFTSRIEELNSKFAIKKVSASQPNLALQAEACNGSGPTSLFVTGLGNGSLTGSLLPNSSSSSQLAKESPMMEEVLLVARGQRQIMHQLDTLSNLMHEYLGERSRQGRTDQTGRMSEVESVAIPLVLTLAIGAVGVFLFKGLTSQK 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi522g00002 661 CDD UMPK_like 68 240 - -
Sebi522g00002 661 Gene3D - 67 246 IPR027417 -
Sebi522g00002 661 Pfam CYTH domain 272 405 IPR023577 -
Sebi522g00002 661 PRINTS Uridine kinase signature 189 199 - -
Sebi522g00002 661 PRINTS Uridine kinase signature 66 83 - -
Sebi522g00002 661 PRINTS Uridine kinase signature 133 148 - -
Sebi522g00002 661 PRINTS Uridine kinase signature 225 238 - -
Sebi522g00002 661 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Sebi522g00002 661 Gene3D - 256 414 - -
Sebi522g00002 661 PANTHER URIDINE KINASE 18 424 - -
Sebi522g00002 661 Pfam Phosphoribulokinase / Uridine kinase family 68 237 IPR006083 GO:0005524|GO:0016301
Sebi522g00002 661 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 237 IPR027417 -
Sebi522g00002 661 Coils Coil 501 528 - -
Sebi522g00002 661 SUPERFAMILY CYTH-like phosphatases 261 408 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi522g00002 Sebi-Chr522 14889 23896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi522g00002 69 237 PRT Gene Family AT5G40870 28.090 1.26e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi522g00002 K00876 - gmx:100803122 1176.39