Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi521g00009 ATGGACAACCAGCCTCGTATCAATTCTGCATTGGCACATGCCATTTGTATTGCAAAGAAAGACGACAGTAATGGTAGAGTCAATAGGCCTTCTCGTGTTCCTCCTTATACAAATAATCAAGATAAACCAGATCAACCATATATGACGGATCGTGCACAAAGGAAGGGTCGTGCTAATGCTGCAAGTGGAAAGATTTTTGTCACTGTGCCTACTGATCATTTTGGTCCAATCCCACCAGAGAATGACCCTTTGCATAATAAGGGTCTGGTAGTTGGTGAATCTTGGCCAGATAGGTTGGAGTGTAGGCAATGGGGTGCTCACTTCTTACCAATTGGTGGCATTGTCGGACAATCAAATCGAGCTGCACAATCCGTTGTTCTCTCTGGAGGTTATGTTGATGATGAGGATCATGGAGAATGGTTTCTCTACACAGGAAGTGGTGGTAAGGATCTCACTGGAAACAAACACACAAACAAGAATCACTCTTTTGACCAGAAGTTTGAAAAATACAATCGCGCACTCCAGATCAGTTGTCAAGAGGTTATCCGGTTCGAGTTGTGA 561 0.4367 MDNQPRINSALAHAICIAKKDDSNGRVNRPSRVPPYTNNQDKPDQPYMTDRAQRKGRANAASGKIFVTVPTDHFGPIPPENDPLHNKGLVVGESWPDRLECRQWGAHFLPIGGIVGQSNRAAQSVVLSGGYVDDEDHGEWFLYTGSGGKDLTGNKHTNKNHSFDQKFEKYNRALQISCQEVIRFEL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi521g00009 186 MobiDBLite consensus disorder prediction 22 61 - -
Sebi521g00009 186 SUPERFAMILY PUA domain-like 58 178 IPR015947 -
Sebi521g00009 186 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 3 180 IPR045134 -
Sebi521g00009 186 ProSiteProfiles YDG domain profile. 84 186 IPR003105 -
Sebi521g00009 186 MobiDBLite consensus disorder prediction 30 46 - -
Sebi521g00009 186 Gene3D - 55 184 IPR036987 -
Sebi521g00009 186 Pfam SAD/SRA domain 85 180 IPR003105 -
Sebi521g00009 186 SMART G9a_1 79 186 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi521g00009 Sebi-Chr521 296173 296858 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi521g00009 5 179 C2H2 Transcription Factor Family AT5G39550 58.286 4.82e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi521g00009 K10638 - gmx:100801535 281.567