Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi520g00034 ATGGCTCACGAGATTAAAAAAGAAGAAACCGAATTCAAGGCCACCGCCAGATCCGCCACGTCATCACGCTCCCCCAAGAGATCTCACCCTCCAGACGACGAACAAGAAGGCCTCGCTCAAACGACGCCGTCCGAGGCCAAACGCGCCGTCAACCGCTGCTCCGGCTGTCGGAAGAGGGTTGGTCTCACCGGATTTCGGTGCCGCTGCGGCGACCTATTCTGCGCCGAGCACCGCTACTCTGACCGCCACGACTGCACCTACGATTACAAATCCGCCGGACGAGAGGCCATCGCCAGGGAAAATCCGGTCGTCAAAGCCGCGAAGATCGTCAAATTCTAA 339 0.587 MAHEIKKEETEFKATARSATSSRSPKRSHPPDDEQEGLAQTTPSEAKRAVNRCSGCRKRVGLTGFRCRCGDLFCAEHRYSDRHDCTYDYKSAGREAIARENPVVKAAKIVKF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi520g00034 112 ProSiteProfiles Zinc finger AN1-type profile. 47 93 IPR000058 GO:0008270
Sebi520g00034 112 MobiDBLite consensus disorder prediction 1 47 - -
Sebi520g00034 112 SUPERFAMILY AN1-like Zinc finger 39 106 IPR035896 -
Sebi520g00034 112 Pfam AN1-like Zinc finger 53 90 IPR000058 GO:0008270
Sebi520g00034 112 FunFam Zinc finger AN1-type containing 6 3 108 - -
Sebi520g00034 112 SMART AN1_Zf_4 53 90 IPR000058 GO:0008270
Sebi520g00034 112 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 111 - -
Sebi520g00034 112 Gene3D - 4 108 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi520g00034 Sebi-Chr520 732864 733301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi520g00034 41 112 C2H2 Transcription Factor Family AT3G52800 61.111 1.28e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi520g00034 - - lja:Lj3g3v0478150.1 182.57