Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi520g00023 ATGGAAGAAAGCAGAGGAAGAGTGTGTGTTACTGGAGGTACAGGGTTTATTGGTTCATGGATAATCAAGAGGCTCCTTGAAGATGGTTATTGTGTCAATACCACCATGAGACCTGACCCAGAACACAAGAAAGACCTTAGCTTTCTTACCAACTTACCTGGAGCATCCCAAAGGCTACAAATTCTCATTGCAGATCTCAGCAATCCAGAAAGTTTCAGTGCAGCCATTGAAGGGTGCATTGGTGTTTTCCATGTTGCTACCCCAATTGATTTTGAATTAAGAGAACCTGAGGAAGTAGTGACCAAAAGATCCATTGATGGTGCACTAGGCATTTTGAAGGCCAGTCTCAATTCCAAGACTGTGAAGAGAGTTGTTTACACTTCTAGTGCCTCTGCTGTGGTTTCCAATGGTAAAGAAGATGAAGTGAAGGATGAAAGTTTTTGGAGCGATGTGGATTATCTTAGAGCTTCAAAGCCATTTGGTTGGTCTTATGCAGTTTGTAAGACATTGACAGAAAAGGCAGTGCTTGAATTTGGAGAACAGAATGGATTGGATGTTGTGACAATAGTTCCTACTTTTGTTCTTGGACCCTTTATTTGTCCAAAGCTTCCTAGCTCTGTTCGTGCTTCATTGGATTTCGCATTTGGGCAGAAAGGTGAATTTGGTTACATCCTTCAGACACCTATGGTGCATGTGGATGATGTAGCTAGGGCGCATATATTTCTGCTTGAACATACTAATCCACATGGGAGGTATAATTGTTCACCATGTTTGGTAACTGTTGAAAAGATGTCTGAACTTGTGTCTACCAAATACCCAGAATTTCAACTGCCAACAGTGGACTTTTCCAAGCAAATTGAAGGTTTCAAGGCTCCAGATGTATCCTCAAAGAAGCTAATGGATGCAGGATTTTTGTTCAAGTATGGACTTGAGGAAATGGTTGATGATGCAATTCAGTGCTGCAAGAAAAAGGGTTACCTGCAAGGGGATTGTTCCCCCTTTGTTGTATTATAG 1014 0.4152 MEESRGRVCVTGGTGFIGSWIIKRLLEDGYCVNTTMRPDPEHKKDLSFLTNLPGASQRLQILIADLSNPESFSAAIEGCIGVFHVATPIDFELREPEEVVTKRSIDGALGILKASLNSKTVKRVVYTSSASAVVSNGKEDEVKDESFWSDVDYLRASKPFGWSYAVCKTLTEKAVLEFGEQNGLDVVTIVPTFVLGPFICPKLPSSVRASLDFAFGQKGEFGYILQTPMVHVDDVARAHIFLLEHTNPHGRYNCSPCLVTVEKMSELVSTKYPEFQLPTVDFSKQIEGFKAPDVSSKKLMDAGFLFKYGLEEMVDDAIQCCKKKGYLQGDCSPFVVL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi520g00023 337 FunFam Dihydroflavonol reductase 5 329 - -
Sebi520g00023 337 Pfam NAD dependent epimerase/dehydratase family 8 254 IPR001509 -
Sebi520g00023 337 Gene3D - 5 327 - -
Sebi520g00023 337 CDD FR_SDR_e 8 304 - -
Sebi520g00023 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 318 - -
Sebi520g00023 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 322 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi520g00023 Sebi-Chr520 451942 453672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi520g00023 4 327 Monolignol Biosynthesis Gene Families AT2G02400 36.145 1.69e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi520g00023 - K13265 gmx:100796029 549.666