Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi520g00020 ATGGTTGATCAGGTTCAGCGCCCTAGGACCATTGAGAATGTTGCTGCCCAGCTTCATCTCCGTACTGGTCCTTCTTTGTACCAAAGGCGCACATTTGGGAATTACTCAAATGCCGCATTCCAGTATCCAGTGATGCCAGCATGCAGAGCTACAACTGATCTGTCCACTGTTGCAACAACAGCCTCCCCTGTCTTTGTTGCAGCTCCCGCAGATAAAGGAAACTTTCTTCTTGACTTTCTCATGGGTGGAGTTTCAGCTGCCGTGTCCAAAACTGCTGCTGCCCCCATTGAACGGGTTAAACTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTATAAGGGTATTGGTGATTGTTTTAAGCGAACAATGCAGGAGGAGGGTATGGCTTTGAACTTTGCATTTAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAGGGATGGTTACTGGAAATGGTTTGCGGGAAACTTGGCCTCTGGAGGTGCTGCTGGTGCCTCGAAGACATTGGCATCTGATGGAGTTGCTGGTCTTTACCGTGGTTTCAACATTTCCTGTGTTGGAATCATTGTGTACCGTGGTCTCTACTTTGGAATGTATGATTCCCTGAAGCCAGTTCTCCTGACTGGATCTTTGCAGGCAAAAGGAGGTGCTTCTGATTTTTCTTTAAAGCTTCAAATCCAACCATTTGCTGACAGCTATTGCCTATTTCTTGAACCATTGCAGGATAGCTTTTTCGCTAGCTTTGCCCTTGGATGGCTCATCACCAATGGTGCAGGTCTAGCATCATACCCAATTGACACTGTTAGAAAAGAATGA 843 0.4591 MVDQVQRPRTIENVAAQLHLRTGPSLYQRRTFGNYSNAAFQYPVMPACRATTDLSTVATTASPVFVAAPADKGNFLLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQEEGMALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQAKGGASDFSLKLQIQPFADSYCLFLEPLQDSFFASFALGWLITNGAGLASYPIDTVRKE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi520g00020 280 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 214 IPR018108 -
Sebi520g00020 280 Gene3D Mitochondrial carrier domain 69 177 IPR023395 -
Sebi520g00020 280 SUPERFAMILY Mitochondrial carrier 73 278 IPR023395 -
Sebi520g00020 280 PRINTS Mitochondrial carrier protein signature 78 91 IPR002067 GO:0055085
Sebi520g00020 280 PRINTS Mitochondrial carrier protein signature 260 280 IPR002067 GO:0055085
Sebi520g00020 280 PRINTS Mitochondrial carrier protein signature 91 105 IPR002067 GO:0055085
Sebi520g00020 280 PRINTS Adenine nucleotide translocator signature 172 185 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi520g00020 280 PRINTS Adenine nucleotide translocator signature 256 272 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi520g00020 280 PRINTS Adenine nucleotide translocator signature 119 140 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi520g00020 280 PRINTS Adenine nucleotide translocator signature 75 87 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Sebi520g00020 280 Pfam Mitochondrial carrier protein 175 217 IPR018108 -
Sebi520g00020 280 Pfam Mitochondrial carrier protein 74 135 IPR018108 -
Sebi520g00020 280 Gene3D Mitochondrial carrier domain 178 280 IPR023395 -
Sebi520g00020 280 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 64 177 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi520g00020 Sebi-Chr520 397390 398615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi520g00020 1 280 Antiporters AT3G08580 56.410 1.58e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi520g00020 K05863 - cave:132175453 387.111