Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi520g00003 ATGGCGTTGCCAACCGAGTTCATTGCTGACATAAATTCATCCAAAGAATCGTGGCATATAGTTGCAAGAGTTATTCGTCTGTGGAAAATACCCAACTTTAACAATGCAAAAATCCCTCTTGCTTTGGAGATGGTTCTTTGTGATGAAAGGGGTGGAAAAATTCACACTGTTGTTAGAAGGACTCTGGTTTACAAATTTCAATCAACCCTAATTGAGGGAGCTACTTATTCCATATTTAATTTTGGTGTTGGTGAAAATTCTGGTGAGTTCAAGTATTCTATGCATTTGTACAAGATCAACTTCGAGTACCATACAAGAGTTGTTTTGATGAGGGACTGCACTATTCCCCGATTTCAATATTCATTTGTGTCTTTGGCGGACATAATGGCTCCTACTTTTGACAACAGTTACTTAGTTGACATAATGAGAGTGTTGACTGGTATTGGTACTGAGAAGGAGTATGAGAGGAATCGAAAAAAATATCGCATGAATGTGATGGAATTGGAAATAGATGGGTCCAAAATAGAATGTGCTCTGTTCGAAAATTACCTGGATGATTTGAATGCATTTCTTGCTTGTGGTAATACTACAAATATGGTAGTTGTTGTTCAGCTTGCAAAAGTAAAGTCATTCAAAGGAAAAGTGTCTCTGCAAAATGCTCTCCATGCTACTAAGTTGTTTTTCAACCCTGACTTTGAAAAAGTTGTGGAATTAAGGAAAAGGCTTGAAGAAAACACTGAGTGTGTTTCCCAACCTTTAAGTCAAATTGCTGAAGCTCCAAAGATGTCTCCTAAGGAGGAATTCTTGACTCATACTATAATGAAGACTATTGAGGAGCTAAAGGACTCTAATGAGATATTATATTAG 867 0.3702 MALPTEFIADINSSKESWHIVARVIRLWKIPNFNNAKIPLALEMVLCDERGGKIHTVVRRTLVYKFQSTLIEGATYSIFNFGVGENSGEFKYSMHLYKINFEYHTRVVLMRDCTIPRFQYSFVSLADIMAPTFDNSYLVDIMRVLTGIGTEKEYERNRKKYRMNVMELEIDGSKIECALFENYLDDLNAFLACGNTTNMVVVVQLAKVKSFKGKVSLQNALHATKLFFNPDFEKVVELRKRLEENTECVSQPLSQIAEAPKMSPKEEFLTHTIMKTIEELKDSNEILY 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi520g00003 288 Gene3D - 114 251 IPR012340 -
Sebi520g00003 288 Coils Coil 151 171 - -
Sebi520g00003 288 Pfam Domain of unknown function DUF223 43 138 IPR003871 -
Sebi520g00003 288 CDD RPA1_DBD_A_like 20 107 - -
Sebi520g00003 288 SUPERFAMILY Nucleic acid-binding proteins 119 246 IPR012340 -
Sebi520g00003 288 Gene3D - 5 112 IPR012340 -
Sebi520g00003 288 CDD RPA1_DBD_B_like 140 242 - -
Sebi520g00003 288 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi520g00003 Sebi-Chr520 19743 21092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi520g00003 8 239 Core DNA Replication Machinery Family AT2G06510 26.360 4.85e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi520g00003 - - lja:Lj0g3v0149869.1 251.136