Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi51g00060 ATGTTCATCCCATCGTTCATCGCGTCGAACCGCCAGACCTCCACCTTCATCGCGCCGAGAAGCCTGCACCTGGTGCACAACCACCTGGTTTGCAGCAATGAGCCGCTGCCTTCATCTTGTCCTACCCGGTTTGCAACAACAGTTGCTGCCTTCATCGTTTCTACCCAGTTCGCAGCATTGAGCTACTGCTTGGAGGCCATTAAATCTTTCCTATATTTCGGGTTTTTTTTTCTTACAAAGGACGAGGAAATCAGAGACAATCGAGCTTACGAGTTTCTCCTTGCTGAGTTCCATTCATTAGGACCGCAGTATAATAGTGACATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGATGATGATAGAGACCTTATATTTAGTGATTCTTCTAGTTCTATCGATGATGAAATTCATAATGAAAATGATAGAGTTATTGATTCTGATGATGAAGTTAATGAAGAAGAGGTAGACAGTGATGAGGGAAATGATAATATGGATGCAGAAGTTGGAAGGGGGGTGTCAAGGAGGATAATTGATTTGACAAGTGATGATATATCTGCATTGGAATTCTGTAGTGAAAATGATGCTTTCAATTTTTACTTTTCTTATGCAAGATGTCATGGATTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGCTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTAAAAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGGTTTGATTATAAGACTGGGAAATATAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGAATTGACCCCTGCTAAATTTGTACCTTTAATTCCTGCATATCGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCATGTCAGATAATGGGTTTTCTTGTTGATAAAAAAGGAGGTTATAGAAACGTTGGTTTTTCAAAGAAAGATTTATACAACTACATAAATATGGTTAAGAGGGGTAGGATAAAAGATAAGGATGCAGTGGCTGGGTTAAGTTATTTGCAAGGAAAGGCAGATAATAATCCAATGTTTTTTTCAAGATTCTTATGTTCTGATGATGGGAAACTCACTCATTTGTTTTGGTGTGATGAAATCATTCGGGCAGACTATCAATTTTTTGGTGATGTGCTTGCATTTGATGCAACCTACAAGAAGAATAGGTATAAATATCCACTGGTGATATTTTCCGGCAAAAATCACCACTCTCAGACGTTTATATTTGGGTGCGCACTCATTGCCGATGAAACAATCAATACTTATAAGTGGGTTTTAAGAATGTTTTCAGAAGCAATGTTCAACAAGCATCCAGCTACAGTGGTGACTGATGGTGATGGTGCAATGAGGGAAGCTATTAAGGTAGTATTTCCAAATGCATCTCATAGGTTATGCGGCTAG 1500 0.3913 MFIPSFIASNRQTSTFIAPRSLHLVHNHLVCSNEPLPSSCPTRFATTVAAFIVSTQFAALSYCLEAIKSFLYFGFFFLTKDEEIRDNRAYEFLLAEFHSLGPQYNSDMDLNSDDSAVNLDDDRDLIFSDSSSSIDDEIHNENDRVIDSDDEVNEEEVDSDEGNDNMDAEVGRGVSRRIIDLTSDDISALEFCSENDAFNFYFSYARCHGFAVRRDDVIKDSKGMLIMRQFLCSRAGKRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKYKVVSFLDSHNHELTPAKFVPLIPAYRGLSDGDKAQVDALHSHGVRPCQIMGFLVDKKGGYRNVGFSKKDLYNYINMVKRGRIKDKDAVAGLSYLQGKADNNPMFFSRFLCSDDGKLTHLFWCDEIIRADYQFFGDVLAFDATYKKNRYKYPLVIFSGKNHHSQTFIFGCALIADETINTYKWVLRMFSEAMFNKHPATVVTDGDGAMREAIKVVFPNASHRLCG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi51g00060 499 PANTHER OS01G0519700 PROTEIN 186 498 - -
Sebi51g00060 499 Pfam FAR1 DNA-binding domain 199 289 IPR004330 -
Sebi51g00060 499 MobiDBLite consensus disorder prediction 140 168 - -
Sebi51g00060 499 MobiDBLite consensus disorder prediction 147 164 - -
Sebi51g00060 499 Pfam MULE transposase domain 411 498 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi51g00060 Sebi-Chr51 2515961 2518190 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi51g00060 FAR1 8.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi51g00060 - - ccaj:109794460 439.499