Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi51g00041 ATGGCACGCTTCTCCAGGTCCTCCGCGCCACGGCTCCTCTACGCACTCTACTCCTCACCGTCGCGGGCGGCATCCCTCCTCGGCGGCGCTTTCCACCTGCGGCATTTATCGGCTGGGAACGTGGCGCGCGCGAAGGCGGCGGCGGAGAAGGAGCCGTGGTGGAAAGAGTCAATGGAGCGGCTACGCAACATCGGGATCTCGGCGCATATAGACTCTGGAAAAACGACGCTGACGGAGCGGGTTCTGTACTACACGGGTCGGATCCACGAGATCCATGAGGTTAGGGGCAGGGATGGCGTCGGCGCTAAGATGGACTCCATGGATTTGGAGAGGGAAAAGGGAATCACTATTCAGTCTGCTGCCACTTATTGCACTTGGAAAGACTATAAGATCAACATAATTGACACACCTGGTCATGTTGATTTCACCATTGAGGTCGAGAGGGCTTTGCGTGTCCTTGACGGTGCCATCCTTGTTCTTTGTAGTGTTGGTGGGGTGCAAAGTCAGTCCATTACTGTTGATCGGCAAATGAGAAGATATGAGGTTCCAAGACTTGCATTTATCAACAAGCTTGATCGGATGGGAGCAGATCCATGGAAAGTTTTAAATCAGGCTAGATCTAAGCTTCGGCATCATAGTGCTGCAATTCAAGTTCCAATAGGCTTGGAAGATGATTTTAAGGGACTTGTTGATCTTGTGCAGTTAAAGGCCTACTATTTTCATGGTTCAAATGGTGAAAAAGTTGTCACTGAAGAAGTGCCTACAGATATGGAAGCCTTGGTGGCAGAAAAAAGACGTGAACTAATAGAAACTGTGTCAGAGGTTGATGATATACTTGCCGAAGCTTTTCTTGGCGATGAGACCATAACAGCTGCTGACCTTGAGCCAGTGGTGGATGGTGTGGTTGGAAAAATTGTAGCTGGTGAAGGTGCAGCTGTTTGCACAGGAATAGAGCAAGGAAACCACTGGTGGAGCACAGTGGGAGCAATTCGTAGGGCTACCCTAGCACAGAAATTTATACCAGTATTCATGGGTAGTGCTTTCAAAAATAAGGGGGTACAGCCACTCCTGGATGGTGTAATTAATTATTTGCCATGCCCAATTGAAGTTAGTAATTATGCTCTTGACCAAACTAAGAATGAGGAGAAGGTTGAGTTGCCTGGAAGTCCTGATGGGCCACTTGTGGCACTGGCTTTCAAGTTGGAGGAAGGACGGTTTGGTCAGTTAACGTATCTAAGGTACCCTTCACCTTAG 1254 0.4896 MARFSRSSAPRLLYALYSSPSRAASLLGGAFHLRHLSAGNVARAKAAAEKEPWWKESMERLRNIGISAHIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAIQVPIGLEDDFKGLVDLVQLKAYYFHGSNGEKVVTEEVPTDMEALVAEKRRELIETVSEVDDILAEAFLGDETITAADLEPVVDGVVGKIVAGEGAAVCTGIEQGNHWWSTVGAIRRATLAQKFIPVFMGSAFKNKGVQPLLDGVINYLPCPIEVSNYALDQTKNEEKVELPGSPDGPLVALAFKLEEGRFGQLTYLRYPSP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi51g00041 417 Pfam Elongation factor Tu GTP binding domain 60 365 IPR000795 GO:0003924|GO:0005525
Sebi51g00041 417 NCBIfam small GTP-binding protein domain 61 233 IPR005225 GO:0005525
Sebi51g00041 417 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 36 413 - -
Sebi51g00041 417 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 59 368 IPR000795 GO:0003924|GO:0005525
Sebi51g00041 417 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 105 120 IPR031157 -
Sebi51g00041 417 CDD EF-G 63 367 - -
Sebi51g00041 417 FunFam Ribosome-releasing factor 2, mitochondrial 55 322 - -
Sebi51g00041 417 Gene3D - 53 370 IPR027417 -
Sebi51g00041 417 PRINTS GTP-binding elongation factor signature 63 76 IPR000795 GO:0003924|GO:0005525
Sebi51g00041 417 PRINTS GTP-binding elongation factor signature 132 142 IPR000795 GO:0003924|GO:0005525
Sebi51g00041 417 PRINTS GTP-binding elongation factor signature 184 193 IPR000795 GO:0003924|GO:0005525
Sebi51g00041 417 PRINTS GTP-binding elongation factor signature 112 120 IPR000795 GO:0003924|GO:0005525
Sebi51g00041 417 PRINTS GTP-binding elongation factor signature 148 159 IPR000795 GO:0003924|GO:0005525
Sebi51g00041 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 365 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi51g00041 Sebi-Chr51 1730073 1736512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi51g00041 60 194 Eukaryotic Initiation Factors Gene Family AT3G22980 37.037 3.03e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi51g00041 K02355 - gmx:100783315 668.307