Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi51g00006 ATGAGAGCTTGGGGCAAATGGGTGTCTGAGATTCGTGAACCAAGAAAGAAGTCAAGAATATGGCTTGGAACATACCCAACTGCAGAAATGGCAGCTAGAGCACATGATGTAGCAGCTTTAGCTATCAAAGGCCATTCAGCTTACCTCAATTTCCCAAATTTGGCTCAACATCTTCCAAGGCCTATCAGCACATCTCCCAAGGACATTCAAGCTGCAGCTGCAAAAGCAGCAACCACTGACTTTTCAGAGGCTAAGCATTGTGAAGCTGAACAAGACCAAACAGAACAAGCTTCTTCTTCAAATCTGTCCATAGACAATACTCCAGCAGAGTCTTCAAGTTCTCCATCTACTACTACTACTAGTGATGATGACACACTGTTTGACTTACCAGATCTATTCCCTGATGGAAATAATGGACTGAACTACTATTCTTCTTGGCATTTATGTGCTGTTGATAGTGGATTCAGGCTTGAGGACCCATTTTTGTGGGAAAACTACTAG 501 0.4291 MRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAQHLPRPISTSPKDIQAAAAKAATTDFSEAKHCEAEQDQTEQASSSNLSIDNTPAESSSSPSTTTTSDDDTLFDLPDLFPDGNNGLNYYSSWHLCAVDSGFRLEDPFLWENY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi51g00006 166 MobiDBLite consensus disorder prediction 93 125 - -
Sebi51g00006 166 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Sebi51g00006 166 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 133 - -
Sebi51g00006 166 FunFam Ethylene-responsive transcription factor 2 1 53 - -
Sebi51g00006 166 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Sebi51g00006 166 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Sebi51g00006 166 Pfam AP2 domain 3 45 IPR001471 GO:0003700|GO:0006355
Sebi51g00006 166 MobiDBLite consensus disorder prediction 81 125 - -
Sebi51g00006 166 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Sebi51g00006 166 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi51g00006 Sebi-Chr51 186544 187044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi51g00006 1 162 AP2-EREBP Transcription Factor Family AT2G44940 53.723 1.03e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi51g00006 AP2 7.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi51g00006 - - gmx:100801129 242.662