Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi519g00010 ATGGCCCTCGATACTGCTCGAGGAATGAACTATTTGCACAACTGTAGTCCAACAATAGTTCATCGTGATTTGAAATCTCCAAATCTTCTTGTTGATAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCCTGTCACGTTTGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCTGAGGTGTTGAGAAATGAACCGTCAAATGAAAAGTGTGACGTTTATAGCTTTGGGGTCATATTGTGGGAGCTCTCTACTTTGCAGCAACCATGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTAGGTTTCCAATACCGCCGTCTTGACATTCCAGATAATATGGACCCTGCCGTTGCAGATATTATTAGGAAATGCTGGCAGACAGATTCAAAGTTGAGACCTACATTTGCTGAAATATTGGCTGCTCTGAAGCCATTACAGAAACCAATTATTGGTTCTCAAGTGCCTCGACCGGTAGCATCAAGTAGGAAAGAGAAGGCTCAGCCATCAGTTGAAGAAGACCAAGAAAGATAG 561 0.4314 MALDTARGMNYLHNCSPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRLKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQYRRLDIPDNMDPAVADIIRKCWQTDSKLRPTFAEILAALKPLQKPIIGSQVPRPVASSRKEKAQPSVEEDQER 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi519g00010 186 Pfam Protein tyrosine and serine/threonine kinase 1 151 IPR001245 GO:0004672|GO:0006468
Sebi519g00010 186 Gene3D Transferase(Phosphotransferase) domain 1 1 161 - -
Sebi519g00010 186 PRINTS Tyrosine kinase catalytic domain signature 13 31 IPR001245 GO:0004672|GO:0006468
Sebi519g00010 186 PRINTS Tyrosine kinase catalytic domain signature 60 70 IPR001245 GO:0004672|GO:0006468
Sebi519g00010 186 PRINTS Tyrosine kinase catalytic domain signature 79 101 IPR001245 GO:0004672|GO:0006468
Sebi519g00010 186 PRINTS Tyrosine kinase catalytic domain signature 123 145 IPR001245 GO:0004672|GO:0006468
Sebi519g00010 186 MobiDBLite consensus disorder prediction 163 186 - -
Sebi519g00010 186 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi519g00010 186 FunFam PAS domain-containing protein tyrosine kinase family protein 1 166 - -
Sebi519g00010 186 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi519g00010 186 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Sebi519g00010 186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Sebi519g00010 186 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi519g00010 Sebi-Chr519 230094 233641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi519g00010 1 171 MAP Kinase Kinase Kinase AT1G73660 84.211 3.77e-104 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sebi519g00010 PK_Tyr_Ser-Thr 9.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi519g00010 - - gmx:100816332 344.739