Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi518g00030 ATGTTGTGTGTAGAATTTAATGATGTTAGTGTTGACATGAATCTCTATGACATTACTAAGTCTAAAGACAACAAAAGAAATGGTTTGCTTCTTGAGAAGAAAAAAACAGGTACTTTTGGGTCAAAATGTAAGGGGTTGCTTCTTAATAGTCAGGGTGGACTGAAGCTGAAACTTACTGTGGAAGAGGCTCAGGATTTGCTCCATCCATCCCCAACAGTTAAACCAACCAGTGAGGTGATTGAGGGTATAGAATTTGAAGAATATGAGGAACCTCCTGTCATGGGGAAAAAGGGTATATTCTTAACCCGCTCAAATGGGATAAATGAGCAATGGGCACAGTGTGACAACTGCTCAAAATGGAGGAAGTTGCCAGTTGATATACTTCTTCCCCCTAAGTGGACATGTGTTGAGAATATATGGGATCCGAGCAGGAGTACATGTTCTGCTCCAAATGAAATGAACCCAGAGGAACTGGATCATGTTACGAAAATGATCAAAGGTTAG 504 0.4048 MLCVEFNDVSVDMNLYDITKSKDNKRNGLLLEKKKTGTFGSKCKGLLLNSQGGLKLKLTVEEAQDLLHPSPTVKPTSEVIEGIEFEEYEEPPVMGKKGIFLTRSNGINEQWAQCDNCSKWRKLPVDILLPPKWTCVENIWDPSRSTCSAPNEMNPEELDHVTKMIKG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi518g00030 167 Gene3D - 108 163 - -
Sebi518g00030 167 ProSiteProfiles Zinc finger CW-type profile. 105 155 IPR011124 GO:0008270
Sebi518g00030 167 Pfam CW-type Zinc Finger 110 152 IPR011124 GO:0008270
Sebi518g00030 167 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 14 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi518g00030 Sebi-Chr518 599504 600808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi518g00030 1 166 B3 DNA Binding Superfamily AT4G32010 45.930 8.04e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi518g00030 K09287 - gmx:100778833 206.838