Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi518g00018 ATGGAGAATCTAACTAGGAAGGCAATTGAGGAGCTTGTGAAAGGGCGTGAGGTTGCAAACCAACTTAGAAGTGTAATCAATGAAGGAGGCAATGATGGGTCAGTTATAACAACCCCATTTGCTGAACAACTTGTGAGAGAAGTGCTCATGTCCTTTACTAATTCTCTCTTGTTATTGAGCAATCCCTCTTCTGAATCAGTCTCTGATGTGCAAATCAGAGACTCTTCCAAGTCTGAGGACTCTCAAGAGAGTAATTGCAAGAGTTCCATCAATAAGGAAAGAAGAGGGTGTTACAAGAGAAGGAGAACTTCACAAACATGGGAGAAAGAATCTGGGGCTCCAATTGAAGATGGACATCAATGGAGAAAGTATGGCCAAAAGACAATCTTGAATACCCAATACCCAAGGAACTATTACAGGTGCACTCACAAATATGATCAAGATTGCAAGGCAACAAAACAGGTTCAGAGAGTTCAAGAGGATCCACCCCTTTTTAAGACCACATACTATGGACACCACACTTGTAGAACCTTACAAAACCCTGAGATGATAGTGGATTCTGTTTCTCCTTCTGATCACTCTACCATGTTCCTTAGCTTTGACAACTCCCTCCCAACACCAGCCAAACAAGATTGTCCCTTTTTCTCATCCTCTTCTTTCCCATCATCATCTTCATCAGTGAAAAGGGAGTGCAAGGAAGAGGAGATTCATCCCTCATCTTCCTCCAATGATTACTTACTCTCTTCTGAGCTCACTTTTGATGATTCCACAAGACATGTCACTCTATCATCAACCCTTGACTCAGATCACATAGGGGTTATCCCTGATGTGTTGTATGACTCTGCTGAGTTTGATGATGTCTTTCAGCCCTTTCTTGAACTTAGATGA 888 0.42 MENLTRKAIEELVKGREVANQLRSVINEGGNDGSVITTPFAEQLVREVLMSFTNSLLLLSNPSSESVSDVQIRDSSKSEDSQESNCKSSINKERRGCYKRRRTSQTWEKESGAPIEDGHQWRKYGQKTILNTQYPRNYYRCTHKYDQDCKATKQVQRVQEDPPLFKTTYYGHHTCRTLQNPEMIVDSVSPSDHSTMFLSFDNSLPTPAKQDCPFFSSSSFPSSSSSVKRECKEEEIHPSSSSNDYLLSSELTFDDSTRHVTLSSTLDSDHIGVIPDVLYDSAEFDDVFQPFLELR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi518g00018 295 SMART WRKY_cls 115 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi518g00018 295 ProSiteProfiles WRKY domain profile. 110 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi518g00018 295 MobiDBLite consensus disorder prediction 67 92 - -
Sebi518g00018 295 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 210 IPR044810 GO:0003700
Sebi518g00018 295 SUPERFAMILY WRKY DNA-binding domain 113 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi518g00018 295 MobiDBLite consensus disorder prediction 72 92 - -
Sebi518g00018 295 Gene3D WRKY domain 96 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi518g00018 295 Pfam WRKY DNA -binding domain 116 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi518g00018 Sebi-Chr518 379309 380823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi518g00018 7 259 WRKY Transcription Factor Family AT3G56400 35.472 3.61e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi518g00018 WRKY 1.3e-24 CL0274