Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi517g00053 ATGGCAACTTTGATATTGCCCAAGATAAGCTTGCTGATGCTTGTGCTGTGCCTTTTCCTCTCTTTCGATGACCACAAGTACACCCAAATCCCCAACAACACATTGAACACCATTCCCATACATTCCTTTTCCAAAGGCCCTGTCTCTTTATCTGTCAAGAACTCTGATTCTTCTTCTCACTCCTTCCTTGAATATGATTTCTACCGCAATTCCTGCCCCCAAGCAGAGCGTATTATTCGTGCTACAATTCACCATATTCACCGCGCTACACCCAATTTGGTTCCTGCTCTCATTCGTCTTGCTTTCCATGATTGCTTCATTCAGGGATGTGATGCTTCTGTTTTGTTAGATGGTGATGATTACATTGATTCAGAGAAAGAGTCGCCACCCAATGGAAGTCTTAAAGGCTTTGAAGTCATCGAGACCATCAAATCCAAGCTTGAAGAAGCATGCCCTGGGGTTGTTTCTTGTGCTGATATTGTTGTATTGGCAGCAAGAGACTGTGTGGTTCTGGCTGGTGGTCCATTCTATCCGTTATATACAGGCAGAAGAGATGGTTCTAACTCTTTCGCTGACATAGCAACATACGAGCTTCCTTCACCCTACGGTGATTTATCCCAAACCCTTGCATCCTTCAAATCAAGGGGATTTGATGAAAAAGAGATGGTCACTCTCTTAGGTTCCCACAGCATTGGGGTAATACACTGCCAATTCTTCCAAAACCGTCTCTATAACTTTAGTGGAACTAATGAACCTGACCCTTCTCTAGATATTGAATTTCTAAATCTACTAAGATCAAGGTGCAATCACACTGATGCATCATCCTCTCCAGCATCAGGATATACTTCCCATGGCTCAAATTCATCTGTAGCATTTAAGCCAACTCCATTCAAAGGCTCATCTTCTTCCTCAGTTGAAGATCCAGGAATGATTATGGACTCGGAGCAACCTCAATCAGATTTTGGGATGTTATACTACCGCAGCCTATTGGAAGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGGAAGGAGAAAAAAACCAAGCATTTGGTTAA 1059 0.4287 MATLILPKISLLMLVLCLFLSFDDHKYTQIPNNTLNTIPIHSFSKGPVSLSVKNSDSSSHSFLEYDFYRNSCPQAERIIRATIHHIHRATPNLVPALIRLAFHDCFIQGCDASVLLDGDDYIDSEKESPPNGSLKGFEVIETIKSKLEEACPGVVSCADIVVLAARDCVVLAGGPFYPLYTGRRDGSNSFADIATYELPSPYGDLSQTLASFKSRGFDEKEMVTLLGSHSIGVIHCQFFQNRLYNFSGTNEPDPSLDIEFLNLLRSRCNHTDASSSPASGYTSHGSNSSVAFKPTPFKGSSSSSVEDPGMIMDSEQPQSDFGMLYYRSLLEGKGILYADQQLMEGEKNQAFG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi517g00053 352 PRINTS Haem peroxidase superfamily signature 155 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Haem peroxidase superfamily signature 173 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Haem peroxidase superfamily signature 94 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 Gene3D - 63 203 - -
Sebi517g00053 352 CDD secretory_peroxidase 63 343 IPR033905 GO:0004601|GO:0042744
Sebi517g00053 352 MobiDBLite consensus disorder prediction 274 313 - -
Sebi517g00053 352 FunFam Peroxidase 66 201 - -
Sebi517g00053 352 PRINTS Plant peroxidase signature 72 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Plant peroxidase signature 173 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Plant peroxidase signature 96 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Plant peroxidase signature 154 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Plant peroxidase signature 220 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PRINTS Plant peroxidase signature 135 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 PANTHER PEROXIDASE 25-RELATED 19 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 ProSitePatterns Peroxidases active site signature. 94 105 IPR019794 GO:0004601
Sebi517g00053 352 MobiDBLite consensus disorder prediction 274 309 - -
Sebi517g00053 352 Pfam Peroxidase 80 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 221 231 IPR019793 -
Sebi517g00053 352 SUPERFAMILY Heme-dependent peroxidases 63 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi517g00053 352 Gene3D Peroxidase, domain 2 204 351 - -
Sebi517g00053 352 ProSiteProfiles Plant heme peroxidase family profile. 62 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi517g00053 Sebi-Chr517 703065 705004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi517g00053 60 351 Peroxidase AT4G33870 49.320 3.66e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi517g00053 K00430 - qsa:O6P43_027772 405.986