Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi517g00051 ATGGAGCATGATAAAAATCAATCACTTGAATTTGATGAGCCTAAAGACATTTTTCTTGGTCAAGTTGTGCATAGCCAAGATGAAGCTTATAACTTATACCAAGCACATGCCTTCAAAATGGGGTATAGTGTAAGAAAGGGGAAGGAGTTGTATTATGATAGTGAGAAAAAGTTCATACGCTCCAAATATTATTTTTGTTCCAAAGAAGGGTTTAAAAATAATGAAGTTGAAGGTGAAGTGGCTTATGAAAGAGCAAATTCAAGAACAGGTTGTAAAGCAATGGTGCGATTTAATGTGAGTAAGGAAGGAGTTTGGAAAATTACACAGTTGGTACTCAATCACAATCACGAGTTTGTGCCACCAGAGCAAAGACACTTGTTACGTTCTATGAGAAATGTATCTACTGTCAAAGGGAGCGTGATAAAGTCCATGGTAAATGCTGGTATAAAAGTTACAAAGATTTGGAGTTATTTAGGAGAGGAAGTTGGTGGATTCGATAAACTTGGTTTAACGGTGAAAGATATGCAAAATTATGTCTACACTGAAAAGTTGAAATTGATTGAAGCTGAGGATGCTCAATCATTAGTGAATCTCTTGCGGAGTAGACAAGCATAA 615 0.361 MEHDKNQSLEFDEPKDIFLGQVVHSQDEAYNLYQAHAFKMGYSVRKGKELYYDSEKKFIRSKYYFCSKEGFKNNEVEGEVAYERANSRTGCKAMVRFNVSKEGVWKITQLVLNHNHEFVPPEQRHLLRSMRNVSTVKGSVIKSMVNAGIKVTKIWSYLGEEVGGFDKLGLTVKDMQNYVYTEKLKLIEAEDAQSLVNLLRSRQA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi517g00051 204 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 169 - -
Sebi517g00051 204 Pfam FAR1 DNA-binding domain 32 120 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi517g00051 Sebi-Chr517 693976 694590 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi517g00051 FAR1 1.2e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi517g00051 - - tpra:123905334 307.76