Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi517g00038 ATGGAGGTCTTCAAAGCAATTGCTAAGAAAGAACTTGCAGCTTATGGCAATGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACACACAACTCGTCTCATCAGCACTGAATATATCTAATCTTTTGTGTGGAAGTGACATGAAAGTAATCATCTCCTGTGAACTGAAGAATAATGAAATGCTTAGTTTGTTGCTTGGCATTCTTGCTTATGGGATGGGAGTGCTGTATTACATTCATGGAAATCTTGGGGGAGCTCGAGTAGGAATTGTGGCCAAGCCCTCTGCTGAATTTGTTGCTGGAATACTTGGGACTTGGATTAGTGGAGGTGTTGCTGTTCCACTTGCACTGAGCTATCCTGAAGCAGAGCTCTTGCATGTGATCAATAATTCAGATGTGTCTGTGATTCTGAGTACTGAAGATCATAGTGAATTAATGCAAAGCATAGCCAATAAAACCTCTTCTCAGTTATTTCATCTTCCACTTGTTCCCAATAAGTCTTCAGAGCAAAGCACAGACGAACATTCACAGAGTGGGGAAATTGATGCTGACGGAATTTCCATGGAAAATATTGGAAGATCAAGTGAAGATCCAGCACTGATTTTATACACTAGCGGAACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTGCACAGGTTGAGTTTTTGCCAAAATTTAGTGTCAGGGGAATTTGGCAGAGATGGCGTGAGTCATATCCAAGTGAAGGATCTAAGGCTGATGATGCTATAACTGTATTCACTGGAGTTCCAACTATGTACACCCGACTAATACAAGGTTATCATGCAATGGATCCTGAGCTACAAACCACTTCAGCATCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCTCTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCAGGCACTGTTGGCAAACCATTGCCTGGTGTACAGGTCAGGATTGTTGAAGATGAGGAGAGTGGGAATGAAAAAACTGGAGCTGGTGAACTTTGCGTTAAAAGCACTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGAAATCATTTACAGATGATGGATACTTTAAGACTGGAGATTCAGTTACTACAGATAAAGATGGATATTACATCATTCTAGGACGTACAAATGCCGATATAATCAAGGCTGGTGGCTATAAGCTGTCTGCATTAGAAATTGAATCTGTTATAGTAGAGGCAAGTGGCCATTGTTTTCTGATCCTGTTGTTAACCTTTTTGCAGCATCCAGCTGTCTCAGAATGTTGTGTTTTGGGCTTACCAGACAAAGACTATGGAGAAATTGTAGTTGCAATTATTGTGCCAGAGGCTGGTGCTAAACAAAAGCGAGATGAAGAGTCAAAGCCTGCTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAACTTGCACCTTACAAGATACCAACTCGACTAATCCTGTGGGACTCACTCCCTCGCAATGCCATGGGAAAGGTAAATAAAAAAGAGCTGAAGAAGGTGCTGGAATCAGAGCAGTAA 1644 0.4179 MEVFKAIAKKELAAYGNVAIRADQKSYSYTQLVSSALNISNLLCGSDMKVIISCELKNNEMLSLLLGILAYGMGVLYYIHGNLGGARVGIVAKPSAEFVAGILGTWISGGVAVPLALSYPEAELLHVINNSDVSVILSTEDHSELMQSIANKTSSQLFHLPLVPNKSSEQSTDEHSQSGEIDADGISMENIGRSSEDPALILYTSGTTGKPKGVVHTHRSIIAQVEFLPKFSVRGIWQRWRESYPSEGSKADDAITVFTGVPTMYTRLIQGYHAMDPELQTTSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVRIVEDEESGNEKTGAGELCVKSTSLFKEYWKLPEVTKKSFTDDGYFKTGDSVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVIVEASGHCFLILLLTFLQHPAVSECCVLGLPDKDYGEIVVAIIVPEAGAKQKRDEESKPALSLEELSTWAKDKLAPYKIPTRLILWDSLPRNAMGKVNKKELKKVLESEQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi517g00038 547 SUPERFAMILY Acetyl-CoA synthetase-like 17 545 - -
Sebi517g00038 547 PRINTS AMP-binding signature 196 207 IPR020459 -
Sebi517g00038 547 PRINTS AMP-binding signature 208 216 IPR020459 -
Sebi517g00038 547 PANTHER ACYL-COA SYNTHETASE 227 543 - -
Sebi517g00038 547 Gene3D - 1 228 IPR042099 -
Sebi517g00038 547 Pfam AMP-binding enzyme 254 422 IPR000873 -
Sebi517g00038 547 Pfam AMP-binding enzyme 84 228 IPR000873 -
Sebi517g00038 547 CDD MCS 18 541 - -
Sebi517g00038 547 Gene3D - 229 416 IPR042099 -
Sebi517g00038 547 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Sebi517g00038 547 MobiDBLite consensus disorder prediction 165 186 - -
Sebi517g00038 547 Pfam AMP-binding enzyme C-terminal domain 454 533 IPR025110 -
Sebi517g00038 547 Gene3D - 420 547 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi517g00038 Sebi-Chr517 556269 562508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi517g00038 196 543 Monolignol Biosynthesis Gene Families AT4G19010 26.992 5.65e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi517g00038 K18660 - gmx:100813324 774.622