Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi517g00031 ATGCATCCACCATCTTTGATCCCTTCTTCTCACACTGGATTGCCAGGAGAAGAAGAGAGATCAGTTGCATTTAGTGATAATTTTCAATCAAAAAAGCTGGAAAACTGGGATGAGCATAATATTCTTAATCATCACTCCCCCATAGTTGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGAAATTACTTATTATATAGCCATGGGCATGGGCATGAGGAATTTCAGGTTTCTGGGTCAACAGCATGGTCACATATGGTGCCAGTTTCTTCTTCCCCTAGGTCAAGTGTAACCACTAGCTTCAGTAGTAATAGTAATAATTTATTGGATTTCACTTATAACAAGGCACCAGCAGATCATAGGAAGAACCAACTACCAGATCACATATCTGAGTGTAATAGCAAAGGCAGTGGTGGAGTTTGTAAGAAAACAAGCAGGGGTCTGCCATCTTCAAGCCAACCACCTCTGAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATAACAGCCCTTCACCAGCTAGTTTCCCCCTTTGGAAAGACTGACACAGCTTCTGTCTTGTTGGAAGCCATTGGGTATATCAGATTCCTTCAGGGCCAAATTGAGGCACTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCAACACTCTGTACATGGAGAAAGGAATTCAGTGTTTCCTGAGGACCCCGGTCAGCTGTTGAATGATGGTAGCCTCAAAAGAAAGGGAGCTCCAAACCAGGATATTGGAAAAGAAAAGGAGGCACAAGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCAGTGTCTTGCACCCAACATGTTGGAAATGAAACTGGAGCTGATTACTGGGCTCCAGCATATGGCACCGGATTTTAA 882 0.4331 MHPPSLIPSSHTGLPGEEERSVAFSDNFQSKKLENWDEHNILNHHSPIVDVIKQEVSQSGNYLLYSHGHGHEEFQVSGSTAWSHMVPVSSSPRSSVTTSFSSNSNNLLDFTYNKAPADHRKNQLPDHISECNSKGSGGVCKKTSRGLPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNQHSVHGERNSVFPEDPGQLLNDGSLKRKGAPNQDIGKEKEAQDLRSRGLCLVPVSCTQHVGNETGADYWAPAYGTGF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi517g00031 293 MobiDBLite consensus disorder prediction 1 21 - -
Sebi517g00031 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Sebi517g00031 293 MobiDBLite consensus disorder prediction 124 155 - -
Sebi517g00031 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 207 IPR036638 GO:0046983
Sebi517g00031 293 MobiDBLite consensus disorder prediction 136 151 - -
Sebi517g00031 293 CDD bHLH_AtbHLH_like 156 203 IPR045239 -
Sebi517g00031 293 FunFam Transcription factor bHLH123 family 156 219 - -
Sebi517g00031 293 Gene3D - 156 218 IPR036638 GO:0046983
Sebi517g00031 293 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 275 - -
Sebi517g00031 293 MobiDBLite consensus disorder prediction 210 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi517g00031 Sebi-Chr517 489532 492157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi517g00031 16 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 46.186 6.48e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi517g00031 - - gmx:100802121 392.119