Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi516g00014 ATGATATCAGAGTGCTATGCTCAGCTGAAGTATGTGTTTGAATTCGTCTTGCCAGCTGAAGTATGTGTTCGAACTCGTCTTGCTATTTCGTTGATTTTTTCCCTGCGTTTGGTGGCGGATTCATCTTTTTTTATCATCAAGATTGAATTGCACTGGATCTTCGGCCTTGCGTCTTCTTTGATTCGTTCGATTTCCCTCTTCCAGGTTTGGATGGATACATTGAGTGAAGATTTATTTGATATTTTTATGAGGACAGAATCTAATAGGAAGAGTGATGGTGTCGAACCCGAAAAATCTAATTCACCTCCTAAACATAATGTTGATTCTGATGAGATTGCTGATGGTCATAAAAAGATATCTGAACTTACAGATGAGGATATCAGAGCTCTTGAGTTTGATTCTGAAGAAGATGGATATGTTTTCTACCGTGAGTATGCAAAATTCATAGGGTTTGCTGTTAGGAAACATAATGTGTACAAAGATCGTAATGATGTAATGACAATGAGACAATTTGTATGTAACAAGGAGGGAGAAAGAAGTGGGAAGCACCTTAATAGGACTGATAGAAAGAGGGAGGCAAACGCCATTACACGAACAAAATGCAAAGTTTGA 612 0.3807 MISECYAQLKYVFEFVLPAEVCVRTRLAISLIFSLRLVADSSFFIIKIELHWIFGLASSLIRSISLFQVWMDTLSEDLFDIFMRTESNRKSDGVEPEKSNSPPKHNVDSDEIADGHKKISELTDEDIRALEFDSEEDGYVFYREYAKFIGFAVRKHNVYKDRNDVMTMRQFVCNKEGERSGKHLNRTDRKREANAITRTKCKV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi516g00014 203 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 100 203 - -
Sebi516g00014 203 Pfam FAR1 DNA-binding domain 141 202 IPR004330 -
Sebi516g00014 203 MobiDBLite consensus disorder prediction 90 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi516g00014 Sebi-Chr516 297762 299297 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi516g00014 FAR1 1.9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi516g00014 - - ccaj:109792835 102.834