Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi515g00021 ATGGAACAAGTTCAATTGGTTGGGGAGGAGTGTTCCTTGCAGTCAAAAATACTGGAAGGACTTCTTAAATTACCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGATGGGCTAGTGTAAACCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTTTGGGGCTTCTGTTTGCTTTTGAAGAGTTAACCTCAAAGCTTAAAAATCAGCCAAGATTTGATACAACCTTTTACAACACCTGCACTCGTGTTACTGTAGATTGGAGCTACTCAGTTCTTCTTAAAATCCCTTCCCAGCAAATGTTGAAAATGATTCATAACCATTTCCAAGTTCGTTCTGCAACTCTGGATACTTGGCTTCCAGAGCAAGTTGCTTTCATTCATT 403 0.402 MEQVQLVGEECSLQSKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGLLFAFEELTSKLKNQPRFDTTFYNTCTRVTVDWSYSVLLKIPSQQMLKMIHNHFQVRSATLDTWLPEQVAFIH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi515g00021 134 ProSiteProfiles ARF GTPase-activating proteins domain profile. 15 134 IPR001164 GO:0005096
Sebi515g00021 134 PRINTS HIV Rev interacting protein signature 27 46 IPR001164 GO:0005096
Sebi515g00021 134 PRINTS HIV Rev interacting protein signature 117 134 IPR001164 GO:0005096
Sebi515g00021 134 PRINTS HIV Rev interacting protein signature 46 63 IPR001164 GO:0005096
Sebi515g00021 134 Gene3D Arf GTPase activating protein 5 134 IPR038508 -
Sebi515g00021 134 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 116 134 IPR044520 GO:0005096
Sebi515g00021 134 SUPERFAMILY ArfGap/RecO-like zinc finger 15 63 IPR037278 -
Sebi515g00021 134 Pfam Putative GTPase activating protein for Arf 16 62 IPR001164 GO:0005096
Sebi515g00021 134 SMART arf_gap_3 15 133 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi515g00021 Sebi-Chr515 441981 443766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi515g00021 7 61 C2H2 Transcription Factor Family AT4G05330 52.727 1.42e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi515g00021 K12486 - bvg:104907225 115.161