Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi515g00013 ATGGCAGACATTACAAATGCCACTTTGAATGGACTGGAGATAATGAAAATCAGCAATGTATTGAAGAGCTTGGATGGACTTTCTTCAGTTGAGAGTCTCCTTCCTAGTTCATCATCAAGCAAGAACAAGATAGGAATAATAGTTGGTCCTGTTGTTGGGGCTGTGGCTGCCATAGCTTTGGCTGACCATGACAAAAATGTCAACAATTCACAGAAGAGTGGAACTGCAAGCTGCATTTCTTTAGCTTCCTCAAATCTTGGACGGTTCTTCACTTTCCAAGAAATCCTTGATGCAACTAACAAATTTGATGAGAAGCTGCTTCTAGGTGTTGGTGGTTTTGGTAGGGTTTATAAGGGAACACTGGAAGACGGGACCAATGTAGCTGTTAAAAGGGGGAACCCTAGATCTGAACAAGACCTACCACCTTTATCATGGAAGCAACGACTTGAAATTTGCATTGGAGCAGCAAGAGGTCTTCATTATCTCCACACCGGTGCATCTCAAAGCATAATTCGAGATGTAAAGACAACAAACATCCTCTTAGATGATAACTTTGTTGCTAAAGTTGCTGACTTTGGCCTTTCCAAGACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGTTTGGAGGACAGCTGAGAAGTGCTTGGCTGAGTATGGAGTGGATAGGCCATCAATGGGAGATGTCTTGTGGAATCTTGAATATGCTCTGCAGCTCCAAGAGACATCATCAGCACTCATGGAGCCTGATGATAACAGCACAAACCACATTACCGGAATTCAGTTGACTCGTCTTGAGCATTTTGATAACAGTGTGAGTATGATTGATGGGGGCATCTCTGGCACGATGATGATGTAG 870 0.4333 MADITNATLNGLEIMKISNVLKSLDGLSSVESLLPSSSSSKNKIGIIVGPVVGAVAAIALADHDKNVNNSQKSGTASCISLASSNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKVWRTAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPDDNSTNHITGIQLTRLEHFDNSVSMIDGGISGTMMM 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi515g00013 289 Gene3D Transferase(Phosphotransferase) domain 1 83 137 - -
Sebi515g00013 289 Pfam Protein tyrosine and serine/threonine kinase 141 207 IPR001245 GO:0004672|GO:0006468
Sebi515g00013 289 SMART tyrkin_6 102 279 IPR020635 GO:0004713|GO:0006468
Sebi515g00013 289 ProSiteProfiles Protein kinase domain profile. 1 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi515g00013 289 PANTHER OS07G0166700 PROTEIN 88 138 IPR045272 GO:0004714|GO:0006468
Sebi515g00013 289 ProSitePatterns Protein kinases ATP-binding region signature. 108 130 IPR017441 GO:0005524
Sebi515g00013 289 SUPERFAMILY Protein kinase-like (PK-like) 88 243 IPR011009 -
Sebi515g00013 289 Gene3D Transferase(Phosphotransferase) domain 1 138 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi515g00013 Sebi-Chr515 155628 156985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi515g00013 211 278 Receptor kinase-like Gene Family AT3G46290 59.722 2.67e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi515g00013 PK_Tyr_Ser-Thr 5.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi515g00013 - - gmx:100803996 286.574