Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi514g00008 ATGCTGAAGCGCCCCGGCCGCCAGGAGTCCCTCTCTGACAAGATCTACAGGTTCCGAGGGACTCTACTTGTGATCTCGATCCCGCTCTTTCTCATCACCTTCGTACTCTATGTGATGCCGTCGAGCTCCTCCAACGAGTCCGTCGGAGACTACGCCCTCGTTAATCGGAAAATGTCACCCGATAGAAAATCTGCTGGTTCATACGCCGTCATCTTCGACGCCGGCAGCTCCGGCAGCCGCGTCCACGTCTTCCATTTCGACCAGAACCTGGATCTCGTTCACATTGGCAAAGATCTCGAACTTTTCGTGCAGATTAAACCGGGTTTGAGTGCATACGCTCAGAATCCTCAACAGGCAGCGGAATCTTTGGTTTCGCTTTTGGATAAAGCGGAGGGTGTTGTTCCTCGGGAATTGCGATCCAAGACACCCGTTCGAGTTGGGGCAACTGCGGGTTTGAGAGCTTTGGAGGGGGATGCATCTGATAGGATCTTGCAAGCGGTAAGGGATTTGCTCAAGGAAAGAAGCTCATTGAAATCTGAGTCTGATGCGGTTACGGTGCTGGATGGGACACAAGAAGGTGCTTATCAATGGGTTACTATTAACTATCTTCTGGGAAACTTGGGAAAAGATTATTCGAAAACAGTTGGGGTAGTTGATCTTGGAGGTGGGTCTGTTCAAATGGCCTATGCCATCTCAGAGACTGAGGCTGCCATGGCTCCAAAAGCAACAGATGGAGATGACCCATATGTCAAGGAGATGTTCCTGAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGCATTATGGTTTACTAGCTGCTCGTGCAGAAATTTTAAAGGTTTCTGATGATGCTGACAACCCTTGTATCTTATCTGGCTATGATGGATCTTACAAATATGGAGGAAAGTCGTTTAGGGCTACATCCTCTCCGTCTGGGTCAAGCTTAAATGAATGCAAAAGCATTGCTCACAATGCTCTCAAAGTTAATGAGTCAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGAGGTGGGGATGGACAGAAAAACCTTTTTGTTGCCTCGTTTTTCTTTGACCGGGCTGCTGAG 1107 0.4806 MLKRPGRQESLSDKIYRFRGTLLVISIPLFLITFVLYVMPSSSSNESVGDYALVNRKMSPDRKSAGSYAVIFDAGSSGSRVHVFHFDQNLDLVHIGKDLELFVQIKPGLSAYAQNPQQAAESLVSLLDKAEGVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKERSSLKSESDAVTVLDGTQEGAYQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETEAAMAPKATDGDDPYVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKVSDDADNPCILSGYDGSYKYGGKSFRATSSPSGSSLNECKSIAHNALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAE 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi514g00008 369 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
Sebi514g00008 369 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 364 IPR000407 GO:0016787
Sebi514g00008 369 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Sebi514g00008 369 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 364 IPR000407 GO:0016787
Sebi514g00008 369 Gene3D Exopolyphosphatase. Domain 2 189 369 - -
Sebi514g00008 369 Gene3D - 55 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi514g00008 Sebi-Chr514 616927 622226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi514g00008 6 369 Calmodulin-binding Proteins AT3G04080 71.154 3.21e-179 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi514g00008 K14641 - gmx:100786073 659.062